RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 C5orf17Q8NAS9 161 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 ZNF596Q8TC21 504 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 RGP1Q92546 391 aaPredicted RBP9.91□□□□□ -0.82
NOD1-201ENST00000222823 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 PERPQ96FX8 193 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 ZNF714Q96N38 554 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 WNT5BQ9H1J7 359 aa9.91□□□□□ -0.82
NOD1-201ENST00000222823 PDE6DO43924 150 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 CXorf1O96002 111 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 SFTPCP11686 197 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 BTCP35070 178 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 H1FOOQ8IZA3 346 aaPredicted RBP9.9□□□□□ -0.82
NOD1-201ENST00000222823 TCTEX1D1Q8N7M0 179 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 SNX22Q96L94 193 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 PCGF1Q9BSM1 259 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 IL19Q9UHD0 177 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 FAM74A7A6NL05 159 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 PITX3O75364 302 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 CCKARP32238 428 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 SULT1A2P50226 295 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 IGKV3D-11A0A0A0MRZ8 115 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 ODAMA1E959 279 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 TMEM14DPA8MWL7 114 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 RAMP1O60894 148 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 IGLV3-19P01714 112 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 P01737 135 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 CSN3P07498 182 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
NOD1-201ENST00000222823 FAM222BQ8WU58 562 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 Q96M66 194 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 SIRT7Q9NRC8 400 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.82
NOD1-201ENST00000222823 KIF26BQ2KJY2 2108 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 IGKV3-7A0A075B6H7 116 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 DEDDO75618 318 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 C1QL1O75973 258 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 MMP9P14780 707 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 CTSSP25774 331 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 C10orf128Q5T292 105 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 OR1L1Q8NH94 360 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 KLF14Q8TD94 323 aaPredicted RBP9.9□□□□□ -0.83
NOD1-201ENST00000222823 NRIP2Q9BQI9 281 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.83
NOD1-201ENST00000222823 TUBD1Q9UJT1 453 aa9.9□□□□□ -0.83
NOD1-201ENST00000222823 RPL27AP46776 148 aaKnown RBP9.89□□□□□ -0.83
NOD1-201ENST00000222823 FGFRL1Q8N441 504 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 LRRC75AQ8NAA5 344 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 RSG1Q9BU20 258 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 IFT22Q9H7X7 185 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 NOTCH4Q99466 2003 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 ABCA4P78363 2273 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 PKDREJQ9NTG1 2253 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 HIST3H3Q16695 136 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 MRPL54Q6P161 138 aaKnown RBP9.89□□□□□ -0.83
NOD1-201ENST00000222823 GCSAMQ8N6F7 178 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 OR5R1Q8NH85 324 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 DIDO1Q9BTC0 2240 aaKnown RBP9.89□□□□□ -0.83
NOD1-201ENST00000222823 IGSF23A1L1A6 192 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 ZNF716A6NP11 495 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
NOD1-201ENST00000222823 MC5RP33032 325 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 NPBWR2P48146 333 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 UNC119Q13432 240 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
NOD1-201ENST00000222823 IGHV3-21A0A0B4J1V1 117 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 TEX50A0A1B0GTY4 177 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 IGHMP01871 453 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 RFPL3SP0C7P2 107 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 RPL29P47914 159 aaKnown RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 OR10C1Q96KK4 312 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 TIMP4Q99727 224 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 CISD1Q9NZ45 108 aaKnown RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 CHCHD2Q9Y6H1 151 aaPredicted RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 IGHV3-72A0A0B4J1Y9 119 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 SRSF10O75494 262 aaKnown RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 BCL2P10415 239 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 USF1P22415 310 aaPredicted RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 WNT5AP41221 380 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 COL4A6Q14031 1691 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 C5orf66Q9H5L9 145 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 UTRNP46939 3433 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 LOC101059948A0A1B0GTJ6 334 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 OR2A4O95047 310 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 ORM1P02763 201 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 CEBPDP49716 269 aaPredicted RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 H2BFSP57053 126 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 SAXO1Q8IYX7 474 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 OR2A7Q96R45 310 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms