RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 RAB29O14966 203 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 UPK1BO75841 260 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 SAA2P0DJI9 122 aaPredicted RBP13.25□□□□□ -0.29
LIM2-201ENST00000221973 FAUP35544 74 aaKnown RBP13.25□□□□□ -0.29
LIM2-201ENST00000221973 CEACAM3P40198 252 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 GPR12P47775 334 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 REG1BP48304 166 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 DYNAPQ8N1N2 210 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 OR51S1Q8NGJ8 323 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 SECTM1Q8WVN6 248 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 TOMM40LQ969M1 308 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 RPEQ96AT9 228 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 MOB3AQ96BX8 217 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 MALSU1Q96EH3 234 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 PIPOXQ9P0Z9 390 aa13.25□□□□□ -0.29
LIM2-201ENST00000221973 OR5H14A6NHG9 310 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
LIM2-201ENST00000221973 DEFB112Q30KQ8 113 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 PLA1AQ53H76 456 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 C9orf139Q6ZV77 190 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 ST6GALNAC6Q969X2 333 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 JMJD8Q96S16 334 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 SLC5A7Q9GZV3 580 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 FXYD6Q9H0Q3 95 aa13.24□□□□□ -0.29
LIM2-201ENST00000221973 HSD17B6O14756 317 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 ZNF137PP52743 207 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 AADACL3Q5VUY0 350 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 LHFPL1Q86WI0 220 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 S1PR3Q99500 378 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 PRRT1Q99946 306 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 GHITMQ9H3K2 345 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 SDHAF2Q9NX18 166 aa13.23□□□□□ -0.29
LIM2-201ENST00000221973 CENPXA8MT69 81 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 PLA2G10O15496 165 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 GAPDHP04406 335 aaKnown RBP13.22□□□□□ -0.29
LIM2-201ENST00000221973 FBP1P09467 338 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 PGAM2P15259 253 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 IFITM3Q01628 133 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 AWAT1Q58HT5 328 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 IDO2Q6ZQW0 420 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 ZNF833PQ6ZTB9 187 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 TGIF2LXQ8IUE1 241 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 TERB2Q8NHR7 220 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
LIM2-201ENST00000221973 DEDD2Q8WXF8 326 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 C5orf30Q96GV9 206 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 ZNF48Q96MX3 618 aaPredicted RBP13.22□□□□□ -0.29
LIM2-201ENST00000221973 ZNF251Q9BRH9 671 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 SCP2D1Q9UJQ7 156 aa13.22□□□□□ -0.29
LIM2-201ENST00000221973 M0R1X1 148 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 WIPF1O43516 503 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 PROP1O75360 226 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 ZNF816Q0VGE8 651 aaPredicted RBP13.21□□□□□ -0.29
LIM2-201ENST00000221973 BAMBIQ13145 260 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 MOB3BQ86TA1 216 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.29
LIM2-201ENST00000221973 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.21□□□□□ -0.29
LIM2-201ENST00000221973 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 BORCS5Q969J3 196 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.29
LIM2-201ENST00000221973 MRPL20Q9BYC9 149 aaKnown RBP13.21□□□□□ -0.29
LIM2-201ENST00000221973 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 SLC2A8Q9NY64 477 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 GAB2Q9UQC2 676 aa13.21□□□□□ -0.29
LIM2-201ENST00000221973 IGHV1-3A0A0C4DH29 117 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 NAP1L6A6NFF2 107 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 OOSP1A8MZH6 123 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 SLC22A5O76082 557 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 IGLV2-14P01704 120 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 GNRHRP30968 328 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 CCDC144NLQ6NUI1 221 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 FAM71F2Q6NXP2 309 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 ZNF818PQ6ZRF7 136 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 OR8H3Q8N146 312 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 MARCH1Q8TCQ1 289 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 MRGPRFQ96AM1 343 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 TBC1D24Q9ULP9 559 aa13.2□□□□□ -0.3
LIM2-201ENST00000221973 IGHV3-72A0A0B4J1Y9 119 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 TIMM23O14925 209 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 LYRM1O43325 122 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 TXNL1O43396 289 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 TNFSF12O43508 249 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 HKR1P10072 659 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 RAB13P51153 203 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 CCR6P51684 374 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 ARHGDIBP52566 201 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 UCP3P55916 312 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 LINC00205P59089 165 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 LPCAT3Q6P1A2 487 aa13.19□□□□□ -0.3
LIM2-201ENST00000221973 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
LIM2-201ENST00000221973 SLC38A6Q8IZM9 456 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms