RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IGHV2OR16-5A0A0B4J2B6 119 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 OOEPA6NGQ2 149 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 PSPNO60542 156 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 CRYABP02511 175 aaKnown RBP18.61■□□□□ 0.57
CCDC9-201ENST00000221922 METTL15P1P0C7V9 234 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 BCL2P10415 239 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 IAPPP10997 89 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 HBG1P69891 147 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 HBG2P69892 147 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF726P1Q15940 193 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 GALMQ96C23 342 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 KIAA2026Q5HYC2 2103 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 CEBPDP49716 269 aaPredicted RBP18.61■□□□□ 0.57
CCDC9-201ENST00000221922 NCMAPQ5T1S8 102 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF787Q6DD87 383 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 WDR82Q6UXN9 313 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF826PQ6ZT77 177 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 VSIRQ9H7M9 311 aa18.61■□□□□ 0.57
CCDC9-201ENST00000221922 IGHV1-18A0A0C4DH31 117 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 GTF3C1Q12789 2109 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 SMIM21Q3B7S5 101 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 DRAM1Q8N682 238 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 UBALD1Q8TB05 177 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 FAM215AQ9Y5M1 114 aa18.6■□□□□ 0.57
CCDC9-201ENST00000221922 FAM90A26D6RGX4 464 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 IFNL4K9M1U5 179 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 WNT9BO14905 357 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 S100PP25815 95 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 FABP6P51161 128 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 PNRC1Q12796 327 aaPredicted RBP18.59■□□□□ 0.57
CCDC9-201ENST00000221922 Q6ZR03 302 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 RCC1LQ96I51 464 aaKnown RBP18.59■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF665Q9H7R5 613 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 TMEM242Q9NWH2 141 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 SLC25A15Q9Y619 301 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 FRYQ5TBA9 3013 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 GVINP1Q7Z2Y8 2422 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF16P17020 682 aaPredicted RBP18.59■□□□□ 0.57
CCDC9-201ENST00000221922 IL2RGP31785 369 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 OR3A1P47881 315 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 CDX1P47902 265 aaPredicted RBP18.59■□□□□ 0.57
CCDC9-201ENST00000221922 RAB11AP62491 216 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 C1orf185Q5T7R7 199 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 PRAMEF6Q5VXH4 476 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF645Q8N7E2 425 aa18.59■□□□□ 0.57
CCDC9-201ENST00000221922 ASPMQ8IZT6 3477 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 A0A1B0GWJ7 208 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 C12orf77C9JDV5 145 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 ATXN7O15265 892 aaPredicted RBP18.58■□□□□ 0.57
CCDC9-201ENST00000221922 ZNF674Q2M3X9 581 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 CA5BP1Q8WTZ4 195 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 P2RX4Q99571 388 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 WDR61Q9GZS3 305 aaKnown RBP18.58■□□□□ 0.57
CCDC9-201ENST00000221922 TOLLIPQ9H0E2 274 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 HEATR1Q9H583 2144 aaKnown RBP18.58■□□□□ 0.57
CCDC9-201ENST00000221922 MIOXQ9UGB7 285 aa18.58■□□□□ 0.57
CCDC9-201ENST00000221922 TGIF2-C20orf24A0A0A6YYL0 155 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 K7EM74 188 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 PMS2P11Q13670 270 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 MSMO1Q15800 293 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 LCN15Q6UWW0 184 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 SSX7Q7RTT5 188 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 OR1L1Q8NH94 360 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 PINX1Q96BK5 328 aaKnown RBP18.58■□□□□ 0.56
CCDC9-201ENST00000221922 FZR1Q9UM11 496 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 URGCP-MRPS24S4R325 110 aa18.58■□□□□ 0.56
CCDC9-201ENST00000221922 ZFP92A6NM28 416 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 IFITM10A6NMD0 228 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 YIF1AO95070 293 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 TIMP3P35625 211 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 TMEM41BQ5BJD5 291 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 LILRB2Q8N423 598 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 FGFRL1Q8N441 504 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 OR13D1Q8NGV5 346 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 NINJ1Q92982 152 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 OR4C12Q96R67 309 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 MSL2Q9HCI7 577 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 UFSP2Q9NUQ7 469 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 DOK5Q9P104 306 aa18.57■□□□□ 0.56
CCDC9-201ENST00000221922 RND2P52198 227 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 AESQ08117 197 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 KRTCAP3Q53RY4 240 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 ASCL5Q7RTU5 278 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 WASF3Q9UPY6 502 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 CEP250Q9BV73 2442 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 CFAP47Q6ZTR5 3102 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 HBZP02008 142 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 GABRA2P47869 451 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 TMEM14EPQ6UXP3 125 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 MRGPRGQ86SM5 289 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 COQ2Q96H96 371 aa18.56■□□□□ 0.56
CCDC9-201ENST00000221922 SPANXN5Q5MJ07 72 aa18.55■□□□□ 0.56
CCDC9-201ENST00000221922 TIMM23BQ5SRD1 257 aa18.55■□□□□ 0.56
CCDC9-201ENST00000221922 SDF2L1Q9HCN8 221 aa18.55■□□□□ 0.56
CCDC9-201ENST00000221922 VAX2Q9UIW0 290 aa18.55■□□□□ 0.56
CCDC9-201ENST00000221922 AKAP13Q12802 2813 aa18.55■□□□□ 0.56
CCDC9-201ENST00000221922 MKRN2OSH3BPM6 223 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 CYB5BO43169 146 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BKO60814 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 PTBP3O95758 552 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms