RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 HIST1H1BP16401 226 aaKnown RBP14.52□□□□□ -0.08
USB1-201ENST00000219281 MEF2BQ02080 365 aaPredicted RBP14.52□□□□□ -0.08
USB1-201ENST00000219281 TMEM241Q24JQ0 296 aa14.52□□□□□ -0.08
USB1-201ENST00000219281 ZNF808Q8N4W9 903 aaPredicted RBP14.52□□□□□ -0.08
USB1-201ENST00000219281 RPUSD4Q96CM3 377 aaKnown RBP14.52□□□□□ -0.08
USB1-201ENST00000219281 OR2D2Q9H210 308 aa14.52□□□□□ -0.08
USB1-201ENST00000219281 GFOD1Q9NXC2 390 aa14.52□□□□□ -0.08
USB1-201ENST00000219281 TIMM9Q9Y5J7 89 aa14.52□□□□□ -0.08
USB1-201ENST00000219281 DOCK7Q96N67 2140 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 OTOGLQ3ZCN5 2332 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 LY86O95711 162 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 OR3A1P47881 315 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 PPP1CBP62140 327 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 RPS16P62249 146 aaKnown RBP14.52□□□□□ -0.09
USB1-201ENST00000219281 RPL30P62888 115 aaKnown RBP14.52□□□□□ -0.09
USB1-201ENST00000219281 ZNF146Q15072 292 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 ZNF645Q8N7E2 425 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 WDYHV1Q96HA8 205 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 DEFB127Q9H1M4 99 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 CDH20Q9HBT6 801 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 HSPB7Q9UBY9 170 aa14.52□□□□□ -0.09
USB1-201ENST00000219281 PSPNO60542 156 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 SMPD2O60906 423 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 PMS2P11Q13670 270 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 CYP2G1PQ6ZSU1 146 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 MED12LQ86YW9 2145 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 OR10A7Q8NGE5 316 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 OR52L2PQ8NGH6 319 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 GATAD1Q8WUU5 269 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 C5orf30Q96GV9 206 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 AGMATQ9BSE5 352 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 KCNIP1Q9NZI2 227 aa14.51□□□□□ -0.09
USB1-201ENST00000219281 HAND1O96004 215 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 SP1P08047 785 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 DEFA6Q01524 100 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 GAMTQ14353 236 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 SLC10A1Q14973 349 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 OR4X1Q8NH49 305 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 S100PBPQ96BU1 408 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 PACRGQ96M98 296 aaPredicted RBP14.5□□□□□ -0.09
USB1-201ENST00000219281 ODAMA1E959 279 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 GALR2O43603 387 aaPredicted RBP14.5□□□□□ -0.09
USB1-201ENST00000219281 KBTBD11O94819 623 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 FGF7P21781 194 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 PSMB3P49720 205 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 HOXA4Q00056 320 aaPredicted RBP14.5□□□□□ -0.09
USB1-201ENST00000219281 MSMO1Q15800 293 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 BSXQ3C1V8 233 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 CENPVQ7Z7K6 275 aaPredicted RBP14.5□□□□□ -0.09
USB1-201ENST00000219281 OR10G9Q8NGN4 311 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 OR10G7Q8NGN6 311 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 GALMQ96C23 342 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 HIST1H2BLQ99880 126 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 GAB2Q9UQC2 676 aa14.5□□□□□ -0.09
USB1-201ENST00000219281 LRRC30A6NM36 301 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 S1PR2O95136 353 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 PFN1P07737 140 aaKnown RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 RAC2P15153 192 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 TUBG1P23258 451 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 GPX4P36969 197 aaPredicted RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 IDH3GP51553 393 aaPredicted RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 RPL23P62829 140 aaKnown RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 PIP4P1Q86T03 277 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 SLC25A40Q8TBP6 338 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 TMEM147Q9BVK8 224 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 SRD5A3Q9H8P0 318 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 PARD6AQ9NPB6 346 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 PITPNC1Q9UKF7 332 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 ZFHX4Q86UP3 3567 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 CTXND1A0A1B0GTU2 59 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 C12orf77C9JDV5 145 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 ZG16O60844 167 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 NDUFS6O75380 124 aaKnown RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 IL2RGP31785 369 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 BTNL3Q6UXE8 466 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 CXorf67Q86X51 503 aaPredicted RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 MDS2Q8NDY4 140 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 ZDHHC16Q969W1 377 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 RHOVQ96L33 236 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.49□□□□□ -0.09
USB1-201ENST00000219281 UFSP2Q9NUQ7 469 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 ARHGAP21Q5T5U3 1957 aa14.49□□□□□ -0.09
USB1-201ENST00000219281 TMEM30CPA0ZSE6 113 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 C17orf98A8MV24 154 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 WNT9BO14905 357 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 P0C879 139 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 TFF3Q07654 80 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 AESQ08117 197 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 MRPL49Q13405 166 aaKnown RBP14.48□□□□□ -0.09
USB1-201ENST00000219281 ATP6V1FQ16864 119 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 FFAR4Q5NUL3 377 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 ZBTB34Q8NCN2 500 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 OR4F5Q8NH21 305 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 FER1L6-AS2Q96M78 137 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 OR4F4Q96R69 305 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 PARLQ9H300 379 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 KLF13Q9Y2Y9 288 aaPredicted RBP14.48□□□□□ -0.09
USB1-201ENST00000219281 CFAP47Q6ZTR5 3102 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 DMXL1Q9Y485 3027 aa14.48□□□□□ -0.09
USB1-201ENST00000219281 FAM186AA6NE01 2351 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms