RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 GMPPAQ96IJ6 420 aaPredicted RBP11.18□□□□□ -0.62
SRP54-201ENST00000216774 FER1L6-AS2Q96M78 137 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 SRD5A3Q9H8P0 318 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 LAMP3Q9UQV4 416 aa11.18□□□□□ -0.62
SRP54-201ENST00000216774 TRGV5A0A0B4J1U4 118 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 ODAMA1E959 279 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 CLDN14O95500 239 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 ADIRFQ15847 76 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 VASH2Q86V25 355 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 TGIF2LYQ8IUE0 185 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 SPRR3Q9UBC9 169 aa11.17□□□□□ -0.62
SRP54-201ENST00000216774 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 GRPP07492 148 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
SRP54-201ENST00000216774 COX5AP20674 150 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 FGF7P21781 194 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 MPLP40238 635 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 IDH3GP51553 393 aaPredicted RBP11.16□□□□□ -0.62
SRP54-201ENST00000216774 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
SRP54-201ENST00000216774 PSG7Q13046 419 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 LINC00469Q8N7U9 141 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 DTD1Q8TEA8 209 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 NINJ1Q92982 152 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 ACTR3CQ9C0K3 210 aaPredicted RBP11.16□□□□□ -0.62
SRP54-201ENST00000216774 DEFB127Q9H1M4 99 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 CLN8Q9UBY8 286 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 DMDP11532 3685 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 TRIOBPQ9H2D6 2365 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 RAB29O14966 203 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 S1PR2O95136 353 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 HBZP02008 142 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
SRP54-201ENST00000216774 ALKBH6Q3KRA9 238 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 PDZD11Q5EBL8 140 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 SLC25A22Q9H936 323 aa11.16□□□□□ -0.62
SRP54-201ENST00000216774 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 ZNF891A8MT65 544 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 CD55P08174 381 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 FABP4P15090 132 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 C4orf17Q53FE4 359 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 FFAR4Q5NUL3 377 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 CDPF1Q6NVV7 123 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 INO80CQ6PI98 192 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 ZNF66Q6ZN08 573 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 OR52L2PQ8NGH6 319 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 SNX22Q96L94 193 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 TAAR6Q96RI8 345 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 IL17BQ9UHF5 180 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 CEBPDP49716 269 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 BRWD1-AS2P59051 145 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 H2BFWTQ7Z2G1 175 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 ZNF709Q8N972 641 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 WDR31Q8NA23 367 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 OR51G1Q8NGK1 321 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 KLF14Q8TD94 323 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.62
SRP54-201ENST00000216774 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 PARLQ9H300 379 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
SRP54-201ENST00000216774 DNAJC13O75165 2243 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 C17orf98A8MV24 154 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 H7BYZ3 331 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 ZG16O60844 167 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 VENTXO95231 258 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 RD3LP0DJH9 198 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 MDKP21741 143 aaPredicted RBP11.14□□□□□ -0.63
SRP54-201ENST00000216774 GNB2P62879 340 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 DEFA6Q01524 100 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 C9orf152Q5JTZ5 239 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 OBP2BQ9NPH6 170 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 C17orf112F2Z3M2 114 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 LY86O95711 162 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 AESQ08117 197 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 RNFT1Q5M7Z0 435 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
SRP54-201ENST00000216774 ANAPC16Q96DE5 110 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms