RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
USH1C-201ENST00000005226 SCCPDHQ8NBX0 429 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 WDYHV1Q96HA8 205 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 TNRC6AQ8NDV7 1962 aaKnown RBP11.81□□□□□ -0.52
USH1C-201ENST00000005226 NEURL1O76050 574 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 SYNGR4O95473 234 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 SELLP14151 372 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 UBE2G2P60604 165 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
USH1C-201ENST00000005226 GCSAMLQ5JQS6 135 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 PINX1Q96BK5 328 aaKnown RBP11.81□□□□□ -0.52
USH1C-201ENST00000005226 OR5B12Q96R08 314 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 LIN7CQ9NUP9 197 aaKnown RBP11.81□□□□□ -0.52
USH1C-201ENST00000005226 KNTC1P50748 2209 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 MED13Q9UHV7 2174 aa11.81□□□□□ -0.52
USH1C-201ENST00000005226 PGPEP1LA6NFU8 196 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 GYPAP02724 150 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 OR3A1P47881 315 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 NUBP1P53384 320 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 LPAL2Q16609 132 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 BOKQ9UMX3 212 aaPredicted RBP11.8□□□□□ -0.52
USH1C-201ENST00000005226 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 SLC31A2O15432 143 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
USH1C-201ENST00000005226 S1PR2O95136 353 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 IFNA10P01566 189 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 MDP1Q86V88 176 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 ZNF703Q9H7S9 590 aaPredicted RBP11.8□□□□□ -0.52
USH1C-201ENST00000005226 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 ODAMA1E959 279 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 WNT9BO14905 357 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 TGOLN2O43493 480 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 NXPH2O95156 264 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 IL18BPO95998 194 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 PDGFBP01127 241 aaPredicted RBP11.8□□□□□ -0.52
USH1C-201ENST00000005226 SERPINA7P05543 415 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 OR4A8P0C604 315 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
USH1C-201ENST00000005226 IGHV3-43A0A0B4J1X8 118 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 A8MWP6 167 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 J3QT63 122 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 SOX15O60248 233 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 PSPNO60542 156 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 IGHV3-43DP0DP04 118 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 ARR3P36575 388 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 BRWD1-AS2P59051 145 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 ZNF826PQ6ZT77 177 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 OR5R1Q8NH85 324 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 TMEM204Q9BSN7 226 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 OR2J1Q9GZK6 312 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 DEFB108AA8MXU0 73 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 DVL1O14640 695 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 COX5BP10606 129 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 SSX2Q16385 188 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 LINC00596Q86U02 117 aa11.79□□□□□ -0.52
USH1C-201ENST00000005226 CTXND1A0A1B0GTU2 59 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 AESQ08117 197 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 DCAF12Q5T6F0 453 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 FAM78BQ5VT40 261 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 AGMATQ9BSE5 352 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 LRP5LA4QPB2 252 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 HRASP01112 189 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 HNF1AP20823 631 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 MPLP40238 635 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 LTC4SQ16873 150 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 FIP1L1Q6UN15 594 aaKnown RBP11.78□□□□□ -0.52
USH1C-201ENST00000005226 TGIF2LXQ8IUE1 241 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 MCEMP1Q8IX19 187 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 TMEM251Q8N6I4 163 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 FAM173AQ9BQD7 235 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 TTTY12Q9BZ98 90 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 STRADBQ9C0K7 418 aa11.78□□□□□ -0.52
USH1C-201ENST00000005226 TNRC6BQ9UPQ9 1833 aaKnown RBP11.77□□□□□ -0.52
USH1C-201ENST00000005226 LRRC30A6NM36 301 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 PLGLB1Q02325 96 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 C6orf15Q6UXA7 325 aaPredicted RBP11.77□□□□□ -0.52
USH1C-201ENST00000005226 LRP11Q86VZ4 500 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 PKIBQ9C010 78 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.52
USH1C-201ENST00000005226 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.52
USH1C-201ENST00000005226 GPR179Q6PRD1 2367 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms