RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 A0A1B0GX30 115 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 RNF212BA8MTL3 300 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 ITGB1BP1O14713 200 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 LYRM1O43325 122 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 MMP9P14780 707 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 CD34P28906 385 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 LOXL3P58215 753 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 PRB3Q04118 309 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-218ENST00000641491 HERPUD1Q15011 391 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 HLA-DRB5Q30154 266 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 FAAP20Q6NZ36 180 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 LYSMD2Q8IV50 215 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF645Q8N7E2 425 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 CCDC71LQ8N9Z2 235 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-218ENST00000641491 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 CDC42EP3Q9UKI2 254 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 HSD17B6O14756 317 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 TUSC2O75896 110 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 APOA2P02652 100 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 FBP1P09467 338 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 CATR1Q13166 79 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 FAM120AOSQ5T036 256 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF626Q68DY1 528 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 Q6ZPA2 131 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 SLC25A48Q6ZT89 311 aaKnown RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 TERB2Q8NHR7 220 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 C11orf54Q9H0W9 315 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-218ENST00000641491 COPZ2Q9P299 210 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 DPM3Q9P2X0 92 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 RNF150Q9ULK6 438 aa10.57□□□□□ -0.72
PHGDH-218ENST00000641491 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 BUB1B-PAK6H3BSN5 160 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 M0R1X1 148 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 LY6G6DO95868 133 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 GAPDHP04406 335 aaKnown RBP10.56□□□□□ -0.72
PHGDH-218ENST00000641491 RLN1P04808 185 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 SRD5A1P18405 259 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 BRS3P32247 399 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 DLX1P56177 255 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 ASAH1Q13510 395 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 SURF2Q15527 256 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-218ENST00000641491 FAM71F2Q6NXP2 309 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 DHRS11Q6UWP2 260 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 C5orf24Q7Z6I8 188 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 CAPSLQ8WWF8 208 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 SDHCQ99643 169 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-218ENST00000641491 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 PRELID3BQ9Y3B1 194 aa10.56□□□□□ -0.72
PHGDH-218ENST00000641491 NSD1Q96L73 2696 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-218ENST00000641491 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 OOSP1A8MZH6 123 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 GPR31O00270 319 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 SAA4P35542 130 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 TAS2R31P59538 309 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 CT45A1Q5HYN5 189 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 AADACL3Q5VUY0 350 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 BRD3OSQ6XYD6 125 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 TMED4Q7Z7H5 227 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 PRIMA1Q86XR5 153 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 C11orf42Q8N5U0 333 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 CT45A3Q8NHU0 189 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 MALSU1Q96EH3 234 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 ZNF486Q96H40 463 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-218ENST00000641491 ABHD14BQ96IU4 210 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 ADTRPQ96IZ2 230 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 SLC2A8Q9NY64 477 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 VPS13CQ709C8 3753 aa10.55□□□□□ -0.72
PHGDH-218ENST00000641491 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 TEX13DA0A0J9YY54 714 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-218ENST00000641491 ODF3BA8MYP8 253 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 H7C2Y5 167 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 SLC31A2O15432 143 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-218ENST00000641491 ANXA3P12429 323 aa10.54□□□□□ -0.72
PHGDH-218ENST00000641491 RAB13P51153 203 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms