RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 DSCAML1Q8TD84 2053 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PPIAL4EA0A075B759 164 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 RNF212BA8MTL3 300 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 DEFB108AA8MXU0 73 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PPIAL4DF5H284 164 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 H0YIZ8 118 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SIGLEC5O15389 551 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 RLN2P04090 185 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PPIAL4FP0DN26 164 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 AGAP20933 346 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SWI5Q1ZZU3 235 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SELENOHQ8IZQ5 122 aaKnown RBP13.68□□□□□ -0.22
PHGDH-216ENST00000641375 CCL17Q92583 94 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SPIN2AQ99865 258 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SPIN2BQ9BPZ2 258 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 TMEM204Q9BSN7 226 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
PHGDH-216ENST00000641375 TMEM106BQ9NUM4 274 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 LIN7CQ9NUP9 197 aaKnown RBP13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PPIAL4AQ9Y536 164 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 CLDN14O95500 239 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 SERPINE2P07093 398 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 RAB13P51153 203 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 ATRAIDQ6UW56 229 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 LILRB2Q8N423 598 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 OR51H1Q8NH63 302 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 RFESDQ8TAC1 157 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 EDARADDQ8WWZ3 215 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 CCL13Q99616 98 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 DCTN5Q9BTE1 182 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 BIN3Q9NQY0 253 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 JPT1Q9UK76 154 aa13.67□□□□□ -0.22
PHGDH-216ENST00000641375 VDAC1P21796 283 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 PPP1CCP36873 323 aaKnown RBP13.66□□□□□ -0.22
PHGDH-216ENST00000641375 GNMTQ14749 295 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 OR5AC2Q9NZP5 309 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 ACACBO00763 2458 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 TMPRSS2O15393 492 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 BCL2L11O43521 198 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 IFNA4P05014 189 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 GNLYP22749 145 aa13.66□□□□□ -0.22
PHGDH-216ENST00000641375 LOXP28300 417 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-216ENST00000641375 SMG1Q96Q15 3661 aaKnown RBP13.65□□□□□ -0.22
PHGDH-216ENST00000641375 TRGV10A0A0A0MS01 117 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 LINC00587B1AMM8 73 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 F2RL2O00254 374 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 DEDDO75618 318 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 SELLP14151 372 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 FAM216BQ8N7L0 139 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 GNG12Q9UBI6 72 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 MLXQ9UH92 298 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 IGHV1-69-2A0A0G2JMI3 117 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 YPEL1O60688 119 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 UQCRFS1P47985 274 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 FOXRED2Q8IWF2 684 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 OR1S1Q8NH92 325 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 AQP10Q96PS8 301 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 CALYQ9NYX4 217 aa13.65□□□□□ -0.22
PHGDH-216ENST00000641375 IGHV3-43A0A0B4J1X8 118 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 A0A1B0GW55 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 CLEC18AA5D8T8 446 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 SCGB1D2O95969 90 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 APOC3P02656 99 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 MBPP02686 304 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L2P0CJ85 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L3P0CJ86 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L4P0CJ87 422 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L5P0CJ88 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L6P0CJ89 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L7P0CJ90 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 CGB3P0DN86 165 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 CGB7P0DN87 165 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 IGHV3-43DP0DP04 118 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 FAM74A3Q4VXF1 159 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4L9Q6RFH8 374 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-216ENST00000641375 CLEC18CQ8NCF0 446 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 OR52M1Q8NGK5 317 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 DUX4Q9UBX2 424 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 ARID1AO14497 2285 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 MEX3AA1L020 520 aaKnown RBP13.64□□□□□ -0.23
PHGDH-216ENST00000641375 GATCO43716 136 aaKnown RBP13.64□□□□□ -0.23
PHGDH-216ENST00000641375 ZG16O60844 167 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 PPOXP50336 477 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 UBA52P62987 128 aaKnown RBP13.64□□□□□ -0.23
PHGDH-216ENST00000641375 CATR1Q13166 79 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 HFEQ30201 348 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 MORN2Q502X0 79 aa13.64□□□□□ -0.23
PHGDH-216ENST00000641375 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms