RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C15orf40Q8WUR7 153 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 RTN4IP1Q8WWV3 396 aaPredicted RBP10.62□□□□□ -0.71
GTF3A-209ENST00000640289 EDARADDQ8WWZ3 215 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 TAF15Q92804 592 aaKnown RBP eCLIP10.62□□□□□ -0.71
GTF3A-209ENST00000640289 SOSTQ9BQB4 213 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 ABCB10Q9NRK6 738 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 V9GYH0 126 aa10.62□□□□□ -0.71
GTF3A-209ENST00000640289 IGHV3-72A0A0B4J1Y9 119 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 IGHV1-3A0A0C4DH29 117 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 BTBD17A6NE02 478 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 CLDN34H7C241 214 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 TRIM77I1YAP6 450 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 PMP2P02689 132 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
GTF3A-209ENST00000640289 RCVRNP35243 200 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 RFX2P48378 723 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 RAB7AP51149 207 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 DYNLT3P51808 116 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 CDK10Q15131 360 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 AANATQ16613 207 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 CCDC144NLQ6NUI1 221 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
GTF3A-209ENST00000640289 MOB3BQ86TA1 216 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 TGIF2LXQ8IUE1 241 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 DRAM1Q8N682 238 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 OR56B4Q8NH76 319 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 CFHR4Q92496 578 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 OR2D2Q9H210 308 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 BATF3Q9NR55 127 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 NECAP2Q9NVZ3 263 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 VPREB3Q9UKI3 123 aa10.61□□□□□ -0.71
GTF3A-209ENST00000640289 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF736B4DX44 427 aaPredicted RBP10.6□□□□□ -0.71
GTF3A-209ENST00000640289 GABARAPH6UMI1 98 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 RAB29O14966 203 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 PROP1O75360 226 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 RBBP9O75884 186 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 OR5H8P0DN80 308 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 FCGR2CP31995 323 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 BRS3P32247 399 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 HRH1P35367 487 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 GPR12P47775 334 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 KRTAP24-1Q3LI83 254 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 C16orf87Q6PH81 154 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 OR8H3Q8N146 312 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 SMIM4Q8WVI0 70 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 FCAMRQ8WWV6 532 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 C5orf30Q96GV9 206 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 MRPL20Q9BYC9 149 aaKnown RBP10.6□□□□□ -0.71
GTF3A-209ENST00000640289 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 MTFP1Q9UDX5 166 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 TCF19Q9Y242 345 aa10.6□□□□□ -0.71
GTF3A-209ENST00000640289 RBM7Q9Y580 266 aaKnown RBP10.6□□□□□ -0.71
GTF3A-209ENST00000640289 NF1P21359 2839 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 A6NDX4 124 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 FAM181BA6NEQ2 426 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 CTDSPLO15194 276 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 LANCL1O43813 399 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 GPR137BO60478 399 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 TUSC2O75896 110 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
GTF3A-209ENST00000640289 AADACP22760 399 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 TAS2R46P59540 309 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF79Q15937 498 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 GLDNQ6ZMI3 551 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-209ENST00000640289 OVCH2Q7RTZ1 564 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-209ENST00000640289 CAPSLQ8WWF8 208 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 S1PR3Q99500 378 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 NABP2Q9BQ15 211 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 SDHAF2Q9NX18 166 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 RABL2AQ9UBK7 228 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-209ENST00000640289 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 RABL2BQ9UNT1 228 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 OR2W1Q9Y3N9 320 aa10.59□□□□□ -0.71
GTF3A-209ENST00000640289 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 M0QYG6 137 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 TXNL1O43396 289 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 CHST1O43916 411 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 CD3DP04234 171 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 CT45A6P0DMU7 189 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 CT45A5P0DMU8 189 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 CT45A7P0DMV0 189 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 LUMP51884 338 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-209ENST00000640289 LINC00205P59089 165 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 ACTBP60709 375 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 ACTG1P63261 375 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 DYRK1AQ13627 763 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms