RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PRH1P02810 166 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 SFTA3P0C7M3 94 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 SNCAP37840 140 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
TRIM3-215ENST00000639856 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 LY6DQ14210 128 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 SMIM21Q3B7S5 101 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 Q6ZRM9 215 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 OR1L1Q8NH94 360 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 COQ2Q96H96 371 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 C19orf12Q9NSK7 152 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 FAM157AC9JC47 383 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 TRIM77I1YAP6 450 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 C1QL1O75973 258 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 IGHV3-13P01766 116 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 TFF1P04155 84 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 ZNF16P17020 682 aaPredicted RBP12.62□□□□□ -0.39
TRIM3-215ENST00000639856 IL2RGP31785 369 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 DYNLT3P51808 116 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 IZUMO4Q1ZYL8 232 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 MRPL37Q9BZE1 423 aaKnown RBP12.62□□□□□ -0.39
TRIM3-215ENST00000639856 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 RNF212BA8MTL3 300 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 C9JQL5 133 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 K7N7A8 449 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 KALRNO60229 2985 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 F12P00748 615 aaPredicted RBP12.62□□□□□ -0.39
TRIM3-215ENST00000639856 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 TMEM182Q6ZP80 229 aaPredicted RBP12.62□□□□□ -0.39
TRIM3-215ENST00000639856 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 RAB40CQ96S21 281 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 CACNG5Q9UF02 275 aa12.62□□□□□ -0.39
TRIM3-215ENST00000639856 IGLV3-9A0A075B6K5 115 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 HBZP02008 142 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 CA7P43166 264 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 GABRA2P47869 451 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 RPL23AP62750 156 aaKnown RBP12.61□□□□□ -0.39
TRIM3-215ENST00000639856 COL10A1Q03692 680 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 OR2G3Q8NGZ4 309 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 TOLLIPQ9H0E2 274 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 PRORYQ9H606 182 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 UMAD1C9J7I0 102 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 KRBOX4Q5JUW0 171 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 TMEM108Q6UXF1 575 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 ST6GALNAC3Q8NDV1 305 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 METRNQ9UJH8 293 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 WSB1Q9Y6I7 421 aa12.61□□□□□ -0.39
TRIM3-215ENST00000639856 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
TRIM3-215ENST00000639856 TXNL1O43396 289 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 SPRY3O43610 288 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 NPBWR1P48145 328 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 TMEM88Q6PEY1 159 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 STX12Q86Y82 276 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 MRGPRDQ8TDS7 321 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 WFIKKN1Q96NZ8 548 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
TRIM3-215ENST00000639856 SYNGR2O43760 224 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 GLIPR1P48060 266 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 CASP6P55212 293 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 PAX5Q02548 391 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 GUK1Q16774 197 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 DHRS7BQ6IAN0 325 aaPredicted RBP12.59□□□□□ -0.39
TRIM3-215ENST00000639856 NINJ1Q92982 152 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
TRIM3-215ENST00000639856 LURAP1Q96LR2 239 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 OR2V2Q96R30 315 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 ATP5SQ99766 215 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 SMG1Q96Q15 3661 aaKnown RBP12.59□□□□□ -0.39
TRIM3-215ENST00000639856 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 SRRM5B3KS81 715 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 H3BP45 60 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 CCL21O00585 134 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 EGR1P18146 543 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 PTAFRP25105 342 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 SULT1A1P50225 295 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
TRIM3-215ENST00000639856 PEA15Q15121 130 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 CD177Q8N6Q3 437 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
TRIM3-215ENST00000639856 MED19A0JLT2 244 aaPredicted RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 TOR1AO14656 332 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 PRDX2P32119 198 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 EIF4EBP1Q13541 118 aaPredicted RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 FAM53AQ6NSI3 398 aaPredicted RBP12.58□□□□□ -0.4
TRIM3-215ENST00000639856 ADAM5Q6NVV9 412 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 FGFRL1Q8N441 504 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 TPRX1Q8N7U7 411 aa12.58□□□□□ -0.4
TRIM3-215ENST00000639856 LFNGQ8NES3 379 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms