RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DRAM1Q8N682 238 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
SNIP1-204ENST00000638725 MISP3Q96FF7 219 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 OR5B12Q96R08 314 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
SNIP1-204ENST00000638725 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
SNIP1-204ENST00000638725 TRAPPC2LQ9UL33 140 aa9.23□□□□□ -0.93
SNIP1-204ENST00000638725 DIDO1Q9BTC0 2240 aaKnown RBP9.23□□□□□ -0.93
SNIP1-204ENST00000638725 NPIPB11E5RHQ5 1161 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 COX5BP10606 129 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 SELLP14151 372 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 CYB561P49447 251 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 RPS16P62249 146 aaKnown RBP9.22□□□□□ -0.93
SNIP1-204ENST00000638725 SPINK14Q6IE38 97 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM14EPQ6UXP3 125 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 FGFRL1Q8N441 504 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 OR4F5Q8NH21 305 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 OR4F4Q96R69 305 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 STRADBQ9C0K7 418 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 ZNF705GA8MUZ8 300 aaPredicted RBP9.22□□□□□ -0.93
SNIP1-204ENST00000638725 CFIP05156 583 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
SNIP1-204ENST00000638725 DEFA4P12838 97 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 WNT5AP41221 380 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 PSMB3P49720 205 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 TAS2R60P59551 318 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 PRSS8Q16651 343 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 SPATA46Q5T0L3 261 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 TMEM37Q8WXS4 190 aa9.22□□□□□ -0.93
SNIP1-204ENST00000638725 OR5B21A6NL26 309 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 A8MWP6 167 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 NTN3O00634 580 aaPredicted RBP9.21□□□□□ -0.93
SNIP1-204ENST00000638725 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.93
SNIP1-204ENST00000638725 OR2H2O95918 312 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 CEACAM6P40199 344 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 IDH3GP51553 393 aaPredicted RBP9.21□□□□□ -0.93
SNIP1-204ENST00000638725 TNFRSF9Q07011 255 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 PMS2P11Q13670 270 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 RAB24Q969Q5 203 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 OR51I2Q9H344 312 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 PLA2G3Q9NZ20 509 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 FUT9Q9Y231 359 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.93
SNIP1-204ENST00000638725 IGHV3-64DA0A0J9YX35 117 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 CTXND1A0A1B0GTU2 59 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 HRASP01112 189 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 LHX2P50458 406 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 PMP22Q01453 160 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 COA6Q5JTJ3 125 aaKnown RBP9.21□□□□□ -0.94
SNIP1-204ENST00000638725 CENPVQ7Z7K6 275 aaPredicted RBP9.21□□□□□ -0.94
SNIP1-204ENST00000638725 OR5T1Q8NG75 326 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 OR10G9Q8NGN4 311 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 OR10G7Q8NGN6 311 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 TMEM170AQ8WVE7 144 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.94
SNIP1-204ENST00000638725 CLN8Q9UBY8 286 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 MRPS18CQ9Y3D5 142 aaKnown RBP9.21□□□□□ -0.94
SNIP1-204ENST00000638725 TIMM9Q9Y5J7 89 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.94
SNIP1-204ENST00000638725 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 DOCK7Q96N67 2140 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PCSK5Q92824 1860 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 J3QT63 122 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 RAMP3O60896 148 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 IL18BPO95998 194 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 GYPAP02724 150 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 G6PCP35575 357 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 NUBP1P53384 320 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PLP2Q04941 152 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 TFF3Q07654 80 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 ZNF497Q6ZNH5 498 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 HES7Q9BYE0 225 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PKIBQ9C010 78 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PAGE4O60829 102 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 KRASP01116 189 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 CLDN18P56856 261 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 ZNF816Q0VGE8 651 aaPredicted RBP9.2□□□□□ -0.94
SNIP1-204ENST00000638725 Q3ZCU0 254 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 FFAR4Q5NUL3 377 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 FAM53AQ6NSI3 398 aaPredicted RBP9.2□□□□□ -0.94
SNIP1-204ENST00000638725 DBX2Q6ZNG2 339 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 WDR86Q86TI4 376 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
SNIP1-204ENST00000638725 PATE3B3GLJ2 98 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 FAM90A26D6RGX4 464 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 IFNL4K9M1U5 179 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ARR3P36575 388 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 FAM3BP58499 235 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 VASH2Q86V25 355 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 APH1AQ96BI3 265 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 WFIKKN1Q96NZ8 548 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 C2orf88Q9BSF0 95 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 BOKQ9UMX3 212 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 FAM166BA8MTA8 275 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms