RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 NT5CQ8TCD5 201 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 DERL1Q9BUN8 251 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 TRA2AQ13595 282 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 PRICKLE4Q2TBC4 344 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 CEACAM18A8MTB9 384 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 HSF4Q9ULV5 492 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 SLC25A2Q9BXI2 301 aa17.01■□□□□ 0.31
CACNA1A-257ENST00000638009 IGLV3-10A0A075B6K4 115 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 IGKV6D-21A0A0A0MT36 114 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 CDAP32320 146 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 TMEM177Q53S58 311 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 LILRA5A6NI73 299 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 F11P03951 625 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 BHLHA15Q7RTS1 189 aaPredicted RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 LINC00470Q9BZP3 86 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 CLDN16Q9Y5I7 305 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 C3orf80F5H4A9 247 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 ADAP1O75689 374 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 CKS1BP61024 79 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 CD300LDQ6UXZ3 194 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 OR52M1Q8NGK5 317 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 CYSLTR1Q9Y271 337 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 ALS2Q96Q42 1657 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 FCGR2BP31994 310 aaPredicted RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 WDR38Q5JTN6 314 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 F11RQ9Y624 299 aaKnown RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 A0A1B0GW15 77 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 VKORC1L1Q8N0U8 176 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 MMP25Q9NPA2 562 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 ABCA3Q99758 1704 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 DEFB109BQ30KR1 87 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 OR2Y1Q8NGV0 311 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 FOXJ2Q9P0K8 574 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 GREB1LQ9C091 1923 aaPredicted RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 BRCA1P38398 1863 aaKnown RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 FGF17O60258 216 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 TNFSF15O95150 251 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 TP53INP2Q8IXH6 220 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 METTL1Q9UBP6 276 aaKnown RBP17■□□□□ 0.31
CACNA1A-257ENST00000638009 LOXL2Q9Y4K0 774 aa17■□□□□ 0.31
CACNA1A-257ENST00000638009 OVOL2Q9BRP0 275 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 NPFFR1Q9GZQ6 430 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 A0A0B4J2E0 115 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 A0A1B0GX12 115 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 ANOS1P23352 680 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 SIGMAR1Q99720 223 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 HDHD3Q9BSH5 251 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 MS4A6AQ9H2W1 248 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 TBC1D29Q9UFV1 150 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 CRPP02741 224 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 PLNP26678 52 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 ZNF56Q15929 161 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 NUBPLQ8TB37 319 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 MRGPRFQ96AM1 343 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 SPANXDQ9BXN6 97 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 IGKV3-7A0A075B6H7 116 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 DPRXA6NFQ7 191 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 PTPMT1Q8WUK0 201 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 STRCQ7RTU9 1775 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
CACNA1A-257ENST00000638009 RIMKLAQ8IXN7 391 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 ATP5IP56385 69 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 THAP10Q9P2Z0 257 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 SIGLEC7Q9Y286 467 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 DSCAML1Q8TD84 2053 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 EMDP50402 254 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 LOXL3P58215 753 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 SH2D5Q6ZV89 423 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 RLFQ13129 1914 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 J3KRW8 73 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 ZNF750Q32MQ0 723 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 CBLN4Q9NTU7 201 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 TUBD1Q9UJT1 453 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 IFNL4K9M1U5 179 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 PRR35P0CG20 571 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 PTP4A1Q93096 173 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 QTRT1Q9BXR0 403 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 YAE1D1Q9NRH1 226 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 GGTLC3B5MD39 225 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 G6PC2Q9NQR9 355 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 LMO7DNF2Z398 122 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 OLIG3Q7RTU3 272 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
CACNA1A-257ENST00000638009 COL9A2Q14055 689 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 PTCRAQ6ISU1 281 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 SDHCQ99643 169 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 ERGP11308 486 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 RFESDQ8TAC1 157 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 FLRT3Q9NZU0 649 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 HBBP68871 147 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 ECSCRQ19T08 205 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 AGAP20933 346 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 EWSR1Q01844 656 aaKnown RBP eCLIP16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 TMEM170BQ5T4T1 132 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 LINC00615Q96LM1 132 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
CACNA1A-257ENST00000638009 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms