RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C5orf66Q9H5L9 145 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 ANAPC10Q9UM13 185 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 PTPRQQ9UMZ3 2332 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 COL6A6A6NMZ7 2263 aa9.78□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BKO60814 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 CGAP01215 116 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BJP06899 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 SELEP16581 610 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BOP23527 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 LMO1P25800 156 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BBP33778 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 CEBPDP49716 269 aaPredicted RBP9.77□□□□□ -0.84
CLN6-217ENST00000636964 UCP2P55851 309 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BDP58876 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BCP62807 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 DAZAP2Q15038 168 aaPredicted RBP9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.84
CLN6-217ENST00000636964 INO80CQ6PI98 192 aaPredicted RBP9.77□□□□□ -0.84
CLN6-217ENST00000636964 FAM180AQ6UWF9 173 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 OR13G1Q8NGZ3 307 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 MUCL1Q96DR8 90 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.84
CLN6-217ENST00000636964 SMG1Q96Q15 3661 aaKnown RBP9.77□□□□□ -0.84
CLN6-217ENST00000636964 AKAP6Q13023 2319 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 MBD3L3A6NE82 208 aaPredicted RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 RHBDL1O75783 438 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 COX5AP20674 150 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 GUK1Q16774 197 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 C17orf78Q8N4C9 275 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 OR5A2Q8NGI9 324 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 MBD3L2Q8NHZ7 208 aaPredicted RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 ZNF442Q9H7R0 627 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 UMAD1C9J7I0 102 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 C1QL1O75973 258 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 RBMXP38159 391 aaKnown RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 MPV17P39210 176 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 RPS10P46783 165 aaKnown RBP9.77□□□□□ -0.85
CLN6-217ENST00000636964 TBR1Q16650 682 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 CLEC18BQ6UXF7 455 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 POC1AQ8NBT0 407 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 GALNT14Q96FL9 552 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 POMT1Q9Y6A1 747 aa9.77□□□□□ -0.85
CLN6-217ENST00000636964 TRAPPC2LH3BP13 241 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 TBPP20226 339 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 GCH1P30793 250 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 VAX1Q5SQQ9 334 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 SPXQ9BT56 116 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 IL36GQ9NZH8 169 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 H0YL77 283 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 CECR9P0C854 216 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 PTGER4P35408 488 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 PSG7Q13046 419 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 ZNF474Q6S9Z5 364 aaPredicted RBP9.76□□□□□ -0.85
CLN6-217ENST00000636964 OR1L6Q8NGR2 347 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 Q8WTZ3 238 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 ALKBH7Q9BT30 221 aaPredicted RBP9.76□□□□□ -0.85
CLN6-217ENST00000636964 HSF4Q9ULV5 492 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 TLN1Q9Y490 2541 aaKnown RBP9.76□□□□□ -0.85
CLN6-217ENST00000636964 PDCD6O75340 191 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 NBEAP1P0C6P0 100 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 FAM87AP0C7U9 286 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 FABP6P51161 128 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 BHLHA15Q7RTS1 189 aaPredicted RBP9.76□□□□□ -0.85
CLN6-217ENST00000636964 MKXQ8IYA7 352 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 WFIKKN1Q96NZ8 548 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 SMIM3Q9BZL3 60 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 HIF1ANQ9NWT6 349 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 MPC1Q9Y5U8 109 aa9.76□□□□□ -0.85
CLN6-217ENST00000636964 OR2C1O95371 312 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 IFNA21P01568 189 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 IGKV3-15P01624 115 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 OR13C7P0DN81 318 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 FUT3P21217 361 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 TMEM33P57088 247 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 TAS2R46P59540 309 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 ERVFRD-1P60508 538 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 GNG3P63215 75 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 PRR30Q53SZ7 412 aaPredicted RBP9.75□□□□□ -0.85
CLN6-217ENST00000636964 AADACL3Q5VUY0 350 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 FBXW12Q6X9E4 464 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 KLF14Q8TD94 323 aaPredicted RBP9.75□□□□□ -0.85
CLN6-217ENST00000636964 ERGIC1Q969X5 290 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 FBXL17Q9UF56 701 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 NAGKQ9UJ70 344 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 NKX6-3A6NJ46 265 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 K7ENP7 123 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 BMP5P22003 454 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
CLN6-217ENST00000636964 RHEBQ15382 184 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 HMGN3Q15651 99 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 Q6ZPA2 131 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms