RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 Q6YL49 198 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 OVCH2Q7RTZ1 564 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 ODF3L1Q8IXM7 274 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 Q8N402 240 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 MFSD4AQ8N468 514 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 TMEM229BQ8NBD8 167 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 FAM216AQ8WUB2 273 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 AGMATQ9BSE5 352 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 SRRQ9GZT4 340 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 AKIP1Q9NQ31 210 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 ZNF107Q9UII5 783 aaPredicted RBP12.92□□□□□ -0.34
CLN6-216ENST00000636876 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
CLN6-216ENST00000636876 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 HSD17B6O14756 317 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 LANCL1O43813 399 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 CD3DP04234 171 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 TBPP20226 339 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 FCGR2CP31995 323 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 ZNF45Q02386 682 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 ZNF816Q0VGE8 651 aaPredicted RBP12.91□□□□□ -0.34
CLN6-216ENST00000636876 DIAPH2-AS1Q14236 149 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 AANATQ16613 207 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 OR8H3Q8N146 312 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 OR8U1Q8NH10 309 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 THAP7Q9BT49 309 aaPredicted RBP12.91□□□□□ -0.34
CLN6-216ENST00000636876 GHITMQ9H3K2 345 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 PIPOXQ9P0Z9 390 aa12.91□□□□□ -0.34
CLN6-216ENST00000636876 SAA2-SAA4A0A096LPE2 208 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 A0A0A6YYJ9 748 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 A0A1W2PPI3 338 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 M0QYG6 137 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 RAB29O14966 203 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 IFNA2P01563 188 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 CD74P04233 296 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 GAPDHP04406 335 aaKnown RBP12.9□□□□□ -0.34
CLN6-216ENST00000636876 CSF1P09603 554 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 SAA2P0DJI9 122 aaPredicted RBP12.9□□□□□ -0.34
CLN6-216ENST00000636876 AADACP22760 399 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 REG1BP48304 166 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 TAS2R19P59542 299 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 BAMBIQ13145 260 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 LRRC75BQ2VPJ9 315 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
CLN6-216ENST00000636876 VAX1Q5SQQ9 334 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 DHRS11Q6UWP2 260 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 GIMAP1Q8WWP7 306 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 RTN4IP1Q8WWV3 396 aaPredicted RBP12.9□□□□□ -0.34
CLN6-216ENST00000636876 TRIM63Q969Q1 353 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 MDFIQ99750 246 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 TAS2R8Q9NYW2 309 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 ZNF221Q9UK13 617 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 RNF150Q9ULK6 438 aa12.9□□□□□ -0.34
CLN6-216ENST00000636876 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
CLN6-216ENST00000636876 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ANKRD20A5PA0PJZ0 165 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 J3QRK9 145 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
CLN6-216ENST00000636876 PPYP01298 95 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 IER3P46695 156 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 GPR12P47775 334 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 DYNLT3P51808 116 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 LUMP51884 338 aaPredicted RBP12.89□□□□□ -0.35
CLN6-216ENST00000636876 ARHGDIBP52566 201 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 HILS1P60008 231 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
CLN6-216ENST00000636876 FAM71F2Q6NXP2 309 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 STEAP1BQ6NZ63 245 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 TGIF2LXQ8IUE1 241 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.89□□□□□ -0.35
CLN6-216ENST00000636876 S100ZQ8WXG8 99 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 S1PR3Q99500 378 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 SSX3Q99909 188 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
CLN6-216ENST00000636876 OR2D2Q9H210 308 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 ESM1Q9NQ30 184 aa12.89□□□□□ -0.35
CLN6-216ENST00000636876 IGHV1-3A0A0C4DH29 117 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 DNAJC9-AS1A6NH13 148 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 H3BUX3 64 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 TIMM23O14925 209 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 TXNL1O43396 289 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 TCF21O43680 179 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 RAB3DO95716 219 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 HERV-K104P61576 105 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 RPL39P5Q59GN2 51 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 TMEM86BQ8N661 226 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 PIFOQ8TCI5 191 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 SDHCQ99643 169 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms