RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ADGRG4Q8IZF6 3080 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 IGKV3D-15A0A087WSY6 115 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 MAP1LC3B2A6NCE7 125 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 DFFBO76075 338 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 IGHEP01854 428 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 ARR3P36575 388 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 NKX6-1P78426 367 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 CNEP1R1Q8N9A8 125 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 Q8NFD4 153 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 MAP1LC3BQ9GZQ8 125 aa11.85□□□□□ -0.51
CACNA1A-228ENST00000636610 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 BCL2P10415 239 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 RPL30P62888 115 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 ABHD5Q8WTS1 349 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 OR51M1Q9H341 326 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 GAB2Q9UQC2 676 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 PLCE1Q9P212 2302 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 A0A1B0GU03 582 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 MDH2P40926 338 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 GABRA2P47869 451 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 Q6P435 159 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A10PA6NDY2 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A18PA6NE21 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A7PA6NKC0 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A23PA8MXZ1 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 HOXA5P20719 270 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 GLIPR1P48060 266 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 FABP6P51161 128 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 S100A12P80511 92 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 EDDM3AQ14507 147 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 RPP25LQ8N5L8 163 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 SLC25A40Q8TBP6 338 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 RAB40CQ96S21 281 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 TMEM204Q9BSN7 226 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 CABLES2Q9BTV7 478 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 STRADBQ9C0K7 418 aa11.84□□□□□ -0.51
CACNA1A-228ENST00000636610 PKDREJQ9NTG1 2253 aa11.83□□□□□ -0.51
CACNA1A-228ENST00000636610 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 B4E171 279 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 ZNF737O75373 536 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 IL2RGP31785 369 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 SSTR5P35346 364 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 TSPAN7P41732 249 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 PPP1R2P9O14990 202 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 YKT6O15498 198 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 ZG16O60844 167 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 HBE1P02100 147 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 MPV17P39210 176 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 KHDC3LQ587J8 217 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 ELOVL1Q9BW60 279 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 TMEM9BQ9NQ34 198 aa11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 INTS1Q8N201 2190 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-228ENST00000636610 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 OR5H1A6NKK0 313 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 S1PR2O95136 353 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 MPLP40238 635 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 UBE2G2P60604 165 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 PPP1CBP62140 327 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 SRSF6Q13247 344 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 GCSAMLQ5JQS6 135 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 SAXO1Q8IYX7 474 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 SDSLQ96GA7 329 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 LINC00470Q9BZP3 86 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 CXorf65A6NEN9 183 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 J3QT63 122 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 TFF3Q07654 80 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 Q6ZS49 121 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 VKORC1L1Q8N0U8 176 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 TCEAL7Q9BRU2 100 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 CDH20Q9HBT6 801 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 ABI3Q9P2A4 366 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 SPRR3Q9UBC9 169 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 MPC1Q9Y5U8 109 aa11.82□□□□□ -0.52
CACNA1A-228ENST00000636610 IGHV2-70P01814 119 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 CRYAAP02489 173 aa11.81□□□□□ -0.52
CACNA1A-228ENST00000636610 TDGF1P13385 188 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms