RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MRM2Q9UI43 246 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-227ENST00000636549 SIGLEC5O15389 551 aa15.46■□□□□ 0.06
CACNA1A-227ENST00000636549 MOSP00540 346 aa15.46■□□□□ 0.06
CACNA1A-227ENST00000636549 INHBBP09529 407 aa15.46■□□□□ 0.06
CACNA1A-227ENST00000636549 ATOH7Q8N100 152 aa15.46■□□□□ 0.06
CACNA1A-227ENST00000636549 DUXBA0A1W2PPF3 345 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 IGF2P01344 180 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 ACAA1P09110 424 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 SLC35B3Q9H1N7 401 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 MANBALQ9NQG1 85 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 ITGB4P16144 1822 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 SFRP2Q96HF1 295 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 SLC25A33Q9BSK2 321 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 LINC00470Q9BZP3 86 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 CALYQ9NYX4 217 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 ZNF680Q8NEM1 530 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 CBY1Q9Y3M2 126 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 MFAP4P55083 255 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 IGHV1-45A0A0A0MS14 117 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 A6NDN8 102 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 M0R381 172 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 PPYP01298 95 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 IGLV3-25P01717 112 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 SMIM18P0DKX4 95 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 INO80CQ6PI98 192 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 ZNF831Q5JPB2 1677 aa15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 ZNFX1Q9P2E3 1918 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-227ENST00000636549 MPC2O95563 127 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 SNRPD3P62318 126 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 WDR73Q6P4I2 378 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 MZB1Q8WU39 189 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 LEUTXA8MZ59 168 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 CXorf1O96002 111 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 RELQ04864 619 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 GZMHP20718 246 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 A0A0U1RQV5 110 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 CLDN34H7C241 214 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 ZNF770Q6IQ21 691 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 SMRP1Q8NCR6 262 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 OR2T10Q8NGZ9 312 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 BSXQ3C1V8 233 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 TMEM95Q3KNT9 176 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 PGLYRP3Q96LB9 341 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 NUDT16L1Q9BRJ7 211 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 DDX60LQ5H9U9 1706 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 IGHV1-69-2A0A0G2JMI3 117 aa15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 RNASEH2CQ8TDP1 164 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 FGF20Q9NP95 211 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-227ENST00000636549 LINC00869P0C866 280 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 C18orf15Q96N68 181 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 NRAPQ86VF7 1730 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 PSCAO43653 123 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 CEACAM4O75871 244 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 SCTP09683 121 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 IL13RA2Q14627 380 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 GFI1BQ5VTD9 330 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 SLC35E3Q7Z769 313 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 TUBD1Q9UJT1 453 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 TCRBV16S1A1N1A0A5B0 115 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 ISLRO14498 428 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 VN1R4Q7Z5H5 301 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 OR2H2O95918 312 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 SLC25A1P53007 311 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 PCSK4Q6UW60 755 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 CLEC19AQ6UXS0 136 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 ARRDC1Q8N5I2 433 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 YIPF6Q96EC8 236 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 C7orf69Q9H7B7 122 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 PXMP4Q9Y6I8 212 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 FAM159AQ6UWV7 190 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 FAM168AQ92567 244 aa15.43■□□□□ 0.06
CACNA1A-227ENST00000636549 F12P00748 615 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 RUNX1Q01196 453 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 ZNF343Q6P1L6 599 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 RIMKLAQ8IXN7 391 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 SMIM4Q8WVI0 70 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 CTSSP25774 331 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 LPAR3Q9UBY5 353 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 FAM27E3Q08E93 113 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 OR5AU1Q8NGC0 362 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 Q6ZNX1 250 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 STHQ8IWL8 128 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 SRSF12Q8WXF0 261 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 CA10Q9NS85 328 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 TMEM160Q9NX00 188 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 A0A0U1RRA0 63 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 B4DEV8 164 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 HINT1P49773 126 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 EWSR1Q01844 656 aaKnown RBP eCLIP15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 SMAGPQ0VAQ4 97 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 ZIC1Q15915 447 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 LHFPL4Q7Z7J7 247 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 SHISA5Q8N114 240 aa15.42■□□□□ 0.06
CACNA1A-227ENST00000636549 TRBV5-4A0A0C4DH59 114 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 NPC2P61916 151 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 OR1P1Q8NH06 330 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 OR2W1Q9Y3N9 320 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 LOC101059948A0A1B0GTJ6 334 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 GDF9O60383 454 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms