RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 KIRREL1Q96J84 757 aa16.64■□□□□ 0.25
CLN8-208ENST00000635751 TSNAXQ99598 290 aaKnown RBP16.64■□□□□ 0.25
CLN8-208ENST00000635751 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
CLN8-208ENST00000635751 PARP11Q9NR21 331 aa16.64■□□□□ 0.25
CLN8-208ENST00000635751 PTPN13Q12923 2485 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 NBPF19A0A087WUL8 3843 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 HOXA4Q00056 320 aaPredicted RBP16.63■□□□□ 0.25
CLN8-208ENST00000635751 TGIF2LYQ8IUE0 185 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 H1FOOQ8IZA3 346 aaPredicted RBP16.63■□□□□ 0.25
CLN8-208ENST00000635751 SVBPQ8N300 66 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 C14orf79Q96F83 325 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 ABHD14BQ96IU4 210 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 PPP1R3CQ9UQK1 317 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 OR2W1Q9Y3N9 320 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 SPG11Q96JI7 2443 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 PGA5P0DJD9 388 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 CDKN1AP38936 164 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 CAV2P51636 162 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 ERVK11-1P61568 191 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 OR5D13Q8NGL4 314 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 IL22RA2Q969J5 263 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 BSCL2Q96G97 398 aaPredicted RBP16.63■□□□□ 0.25
CLN8-208ENST00000635751 RAB1BQ9H0U4 201 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 TREM1Q9NP99 234 aa16.63■□□□□ 0.25
CLN8-208ENST00000635751 FAM212BQ9NTI7 297 aaPredicted RBP16.63■□□□□ 0.25
CLN8-208ENST00000635751 H0Y980 276 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 PVALBP20472 110 aaPredicted RBP16.62■□□□□ 0.25
CLN8-208ENST00000635751 NKX2-1P43699 371 aaPredicted RBP16.62■□□□□ 0.25
CLN8-208ENST00000635751 ARHGDIBP52566 201 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 SRSF3P84103 164 aaKnown RBP16.62■□□□□ 0.25
CLN8-208ENST00000635751 C10orf91Q5T1B1 145 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 SHEQ5VZ18 495 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 BTNL8Q6UX41 500 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 CLEC9AQ6UXN8 241 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 LRRC29Q8WV35 223 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 GINS3Q9BRX5 216 aa16.62■□□□□ 0.25
CLN8-208ENST00000635751 NPIPB11E5RHQ5 1161 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 PGLYRP1O75594 196 aaPredicted RBP16.61■□□□□ 0.25
CLN8-208ENST00000635751 SEC11BP0C7V7 166 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 ADCYAP1P18509 176 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 F2RL1P55085 397 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 SPAG16Q8N0X2 631 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 NRIP2Q9BQI9 281 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 C11orf1Q9H5F2 150 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 WFDC1Q9HC57 220 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 PLA2G2EQ9NZK7 142 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 CARHSP1Q9Y2V2 147 aaKnown RBP16.61■□□□□ 0.25
CLN8-208ENST00000635751 PIGBOS1A0A0B4J2F0 54 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 F8W036 122 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 DNASE2O00115 360 aaPredicted RBP16.61■□□□□ 0.25
CLN8-208ENST00000635751 WNT9BO14905 357 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 ADAM20O43506 726 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 OR2H2O95918 312 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 ACAA1P09110 424 aaPredicted RBP16.61■□□□□ 0.25
CLN8-208ENST00000635751 ATF4P18848 351 aaPredicted RBP16.61■□□□□ 0.25
CLN8-208ENST00000635751 VDAC1P21796 283 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 Q6ZRG5 221 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 UQCC1Q9NVA1 299 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 ARID1AO14497 2285 aa16.61■□□□□ 0.25
CLN8-208ENST00000635751 SIRPB1O00241 398 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 SLC33A1O00400 549 aaPredicted RBP16.6■□□□□ 0.25
CLN8-208ENST00000635751 NUPL2O15504 423 aaKnown RBP16.6■□□□□ 0.25
CLN8-208ENST00000635751 NXPH2O95156 264 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 CYB5R3P00387 301 aaPredicted RBP16.6■□□□□ 0.25
CLN8-208ENST00000635751 EWSR1Q01844 656 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLN8-208ENST00000635751 NMSQ5H8A3 153 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 ZNF497Q6ZNH5 498 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 OR2C3Q8N628 320 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 GCSAMQ8N6F7 178 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 Q8TCH9 128 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 DCAF16Q9NXF7 216 aa16.6■□□□□ 0.25
CLN8-208ENST00000635751 SH2D1BO14796 132 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 SPP1P10451 314 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 EGR1P18146 543 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 F2RP25116 425 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 CFHR2P36980 270 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 NHLH2Q02577 135 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 ZNF146Q15072 292 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 ZNF787Q6DD87 383 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 OR10Z1Q8NGY1 313 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 PLPPR1Q8TBJ4 325 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 CCL17Q92583 94 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 NRGNQ92686 78 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 GPHA2Q96T91 129 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 SEC11CQ9BY50 192 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 TMEM231Q9H6L2 316 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 RNF7Q9UBF6 113 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 FBN2P35556 2912 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 IGHV1-69-2A0A0G2JMI3 117 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 SRRM5B3KS81 715 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 OVOL3O00110 214 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 TNFSF12O43508 249 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 LY6HO94772 140 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 LHBP01229 141 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 WNT2P09544 360 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 FIP1L1Q6UN15 594 aaKnown RBP16.59■□□□□ 0.25
CLN8-208ENST00000635751 PUSL1Q8N0Z8 303 aaKnown RBP16.59■□□□□ 0.25
CLN8-208ENST00000635751 OR10V1Q8NGI7 309 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 IGFBPL1Q8WX77 278 aa16.59■□□□□ 0.25
CLN8-208ENST00000635751 CCL19Q99731 98 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms