RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 OR3A3P47888 321 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 REG1BP48304 166 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 TAS2R46P59540 309 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 SRSF2Q01130 221 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 RNASE12Q5GAN4 147 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 H1FOOQ8IZA3 346 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 OR5AP2Q8NGF4 316 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 FAM216AQ8WUB2 273 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 FCAMRQ8WWV6 532 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 SNAPC3Q92966 411 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 ST6GALNAC6Q969X2 333 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 S1PR3Q99500 378 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 CHIAQ9BZP6 476 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 IFI27L2Q9H2X8 130 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 ZNF221Q9UK13 617 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 PITPNC1Q9UKF7 332 aa15.4■□□□□ 0.06
SQSTM1-216ENST00000626660 FABP12A6NFH5 140 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 NAT1P18440 290 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 GPR12P47775 334 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 RAB13P51153 203 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 ACTBP60709 375 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 ACTG1P63261 375 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 DIAPH2-AS1Q14236 149 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 CDK10Q15131 360 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 LY6EQ16553 131 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 C16orf87Q6PH81 154 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 FAM131AQ6UXB0 335 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 MOB3BQ86TA1 216 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 OR5H2Q8NGV7 314 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 OR52I2Q8NH67 350 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 RTN4IP1Q8WWV3 396 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 RNF150Q9ULK6 438 aa15.39■□□□□ 0.05
SQSTM1-216ENST00000626660 SAA2-SAA4A0A096LPE2 208 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 IGHV1-3A0A0C4DH29 117 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 A0A1W2PPI3 338 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 GABARAPH6UMI1 98 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 TIMM23O14925 209 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 RBBP9O75884 186 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 OR8U9P0C7N5 309 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 SAA2P0DJI9 122 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 OR5H8P0DN80 308 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 FAM71F2Q6NXP2 309 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 LIAT1Q6ZQX7 453 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 DRAM1Q8N682 238 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 OR8U1Q8NH10 309 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 CAPSLQ8WWF8 208 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 ABHD14BQ96IU4 210 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 AGMATQ9BSE5 352 aa15.38■□□□□ 0.05
SQSTM1-216ENST00000626660 CTDSPLO15194 276 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 GPR137BO60478 399 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 CRYBA1P05813 215 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 NFYAP23511 347 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 LUMP51884 338 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 ZNF833PQ6ZTB9 187 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 ODF3L1Q8IXM7 274 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 OR56B4Q8NH76 319 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 PIFOQ8TCI5 191 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 OR2D2Q9H210 308 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 RAB18Q9NP72 206 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 EHFQ9NZC4 300 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 MTFP1Q9UDX5 166 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 TCF19Q9Y242 345 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 OR2W1Q9Y3N9 320 aa15.37■□□□□ 0.05
SQSTM1-216ENST00000626660 PMP2P02689 132 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 FAM106CPP0CH98 169 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 HLA-DMAP28067 261 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 RPL15P61313 204 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 DGCR2P98153 550 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 SSBP1Q04837 148 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 ACTBL2Q562R1 376 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 SPANXN2Q5MJ10 180 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 OR6Q1Q8NGQ2 317 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 SMIM4Q8WVI0 70 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 TMEM158Q8WZ71 300 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 KLK11Q9UBX7 282 aa15.36■□□□□ 0.05
SQSTM1-216ENST00000626660 A6NDX4 124 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 FAM181BA6NEQ2 426 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 RNF212BA8MTL3 300 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 TUSC2O75896 110 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 CD24P25063 80 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 FCGR2CP31995 323 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 HRH1P35367 487 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 HES1Q14469 280 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 RPL39P5Q59GN2 51 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 CCDC190Q86UF4 302 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 THNSL2Q86YJ6 484 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 LYSMD2Q8IV50 215 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 CFHR4Q92496 578 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 SOSTQ9BQB4 213 aa15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 MRPL20Q9BYC9 149 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-216ENST00000626660 ZNF736B4DX44 427 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 J3QRK9 145 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 SLC22A5O76082 557 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 SNRNP70P08621 437 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 PTBP1P26599 531 aaKnown RBP eCLIP15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 CD1BP29016 333 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 RFX2P48378 723 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 DYRK1AQ13627 763 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 HABP2Q14520 560 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms