RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 DSCAMO60469 2012 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 C15orf65H3BRN8 121 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 CST7O76096 145 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
EPB42-210ENST00000622454 SPAG16Q8N0X2 631 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 ESRP2Q9H6T0 727 aaKnown RBP11.67□□□□□ -0.54
EPB42-210ENST00000622454 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 SH3BGRL2Q9UJC5 107 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
EPB42-210ENST00000622454 IGHV3OR15-7A0A075B7D8 119 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 ODAMA1E959 279 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 SYNGR2O43760 224 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 PTAFRP25105 342 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 DYNLT3P51808 116 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 ARHGDIBP52566 201 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 STX12Q86Y82 276 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 ZNF808Q8N4W9 903 aaPredicted RBP11.66□□□□□ -0.54
EPB42-210ENST00000622454 C5orf30Q96GV9 206 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
EPB42-210ENST00000622454 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 IL19Q9UHD0 177 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 STRAPQ9Y3F4 350 aaKnown RBP11.66□□□□□ -0.54
EPB42-210ENST00000622454 IGHV3-43A0A0B4J1X8 118 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 K7N7A8 449 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 IGHV3-43DP0DP04 118 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 ADCYAP1P18509 176 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 CAMLGP49069 296 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 TNFAIP6P98066 277 aaPredicted RBP11.66□□□□□ -0.54
EPB42-210ENST00000622454 ATRAIDQ6UW56 229 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 TCTEX1D1Q8N7M0 179 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 ZNRF1Q8ND25 227 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 TMEM231Q9H6L2 316 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
EPB42-210ENST00000622454 DSCAML1Q8TD84 2053 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.54
EPB42-210ENST00000622454 F8W036 122 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 TXNL1O43396 289 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 RAMP3O60896 148 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 TSPAN15O95858 294 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 PRH1P02810 166 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.54
EPB42-210ENST00000622454 TNFSF4P23510 183 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 ID4P47928 161 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 RPL30P62888 115 aaKnown RBP11.65□□□□□ -0.54
EPB42-210ENST00000622454 ZNF616Q08AN1 781 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 CR1LQ2VPA4 569 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 C10orf91Q5T1B1 145 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 SVBPQ8N300 66 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 EDARADDQ8WWZ3 215 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 GCM1Q9NP62 436 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 RNF7Q9UBF6 113 aa11.65□□□□□ -0.54
EPB42-210ENST00000622454 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.55
EPB42-210ENST00000622454 DYSFO75923 2080 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 DEFB108AA8MXU0 73 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 TRIM77I1YAP6 450 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 AGPAT2O15120 278 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 CLDN1O95832 211 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 ATP6V0CP27449 155 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 SULT1A1P50225 295 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 WFDC8Q8IUA0 241 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 FAM222BQ8WU58 562 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 TCTEX1D2Q8WW35 142 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 NKX6-2Q9C056 277 aaPredicted RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 CARHSP1Q9Y2V2 147 aaKnown RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 FAM96BQ9Y3D0 163 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 NBEAQ8NFP9 2946 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 H3BP45 60 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 TOR1AO14656 332 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 CD5P06127 495 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 FHITP49789 147 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 MIDNQ504T8 468 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 BTNL3Q6UXE8 466 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 ZNF66Q6ZN08 573 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 ZNF561Q8N587 486 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 COMMD1Q8N668 190 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 ATP5SQ99766 215 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 SEC11CQ9BY50 192 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 C19orf12Q9NSK7 152 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
EPB42-210ENST00000622454 TLN1Q9Y490 2541 aaKnown RBP11.64□□□□□ -0.55
EPB42-210ENST00000622454 UMAD1C9J7I0 102 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms