RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PUSL1Q8N0Z8 303 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 CRYGNQ8WXF5 182 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 GDF15Q99988 308 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MS4A7Q9GZW8 240 aaPredicted RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 CBLN4Q9NTU7 201 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 PLA2G3Q9NZ20 509 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 RPS4XP62701 263 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 ORAI1Q96D31 301 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 C2orf88Q9BSF0 95 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 HSPB7Q9UBY9 170 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MARF1Q9Y4F3 1742 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MYO7AQ13402 2215 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 TRGV5A0A0B4J1U4 118 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 KBTBD11-OT1A0A1B0GTJ5 212 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PRD5 423 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PRF3 423 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PRM7 423 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM50BP56557 158 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 SLC25A2Q9BXI2 301 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 LPAR2Q9HBW0 351 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 ASCL3Q9NQ33 180 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MED29Q9NX70 200 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 HSF4Q9ULV5 492 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 TRAV30A0A087WSZ9 112 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 ALG1L2C9J202 215 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 FGF5P12034 268 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 CEACAM16Q2WEN9 425 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 HOGA1Q86XE5 327 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 SPSB4Q96A44 273 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 DNAJC4Q9NNZ3 241 aa6.27□□□□□ -1.4
COLCA1-205ENST00000620864 DNAJB12Q9NXW2 375 aaKnown RBP6.27□□□□□ -1.4
COLCA1-205ENST00000620864 NKX2-2O95096 273 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 HPRT1P00492 218 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 LINC00614P0C842 121 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 CXCL3P19876 107 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 SEC11AP67812 179 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 CT83Q5H943 113 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM196Q5HYL7 178 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 C1orf53Q5VUE5 145 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 C10orf111Q8N326 155 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 OR2Z1Q8NG97 314 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 OR6X1Q8NH79 312 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 ASB1Q9Y576 335 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TNXAQ16473 311 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 MPZL1O95297 269 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 EMDP50402 254 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 HBBP68871 147 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 SP5Q6BEB4 398 aaPredicted RBP6.27□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF441Q8N8Z8 693 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 FLRT3Q9NZU0 649 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TRBV5-4A0A0C4DH59 114 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 SYNGR1O43759 233 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM50AO95807 157 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 IGF2P01344 180 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TSPOP30536 169 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 GALNSP34059 522 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 CAPZBP47756 277 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 OR3A4PP47883 348 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 SF3B5Q9BWJ5 86 aaKnown RBP6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TRIOBPQ9H2D6 2365 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TRAV39A0A0B4J263 110 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 PRSS23O95084 383 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 CTAG1AP78358 180 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 EBLN2Q6P2I7 272 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 RAB1CQ92928 201 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 OVOL2Q9BRP0 275 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 PCGF1Q9BSM1 259 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 ECM29Q5VYK3 1845 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 CD3EP07766 207 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 AGERQ15109 404 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 PRNTQ86SH4 94 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 TP53I13Q8NBR0 393 aaPredicted RBP6.27□□□□□ -1.41
COLCA1-205ENST00000620864 KCNMB2Q9Y691 235 aa6.27□□□□□ -1.41
COLCA1-205ENST00000620864 LOC390937A0A1W2PQ73 354 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A10PA6NDY2 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A18PA6NE21 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A16PA6NEW6 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 LILRA5A6NI73 299 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A20PA6NIJ5 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A8PA6NJQ4 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A7PA6NKC0 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A22PA8MWA6 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A12PA8MX19 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A5PA8MXJ8 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A23PA8MXZ1 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FCGR3AP08637 254 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A15PP0C7V4 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A13PP0C7W8 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A14PP0C7W9 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM90A24PP0C7X0 464 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CEACAM1P13688 526 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 COX7A1P24310 79 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 MFAP4P55083 255 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms