RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 PARM1Q6UWI2 310 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 ASCL4Q6XD76 172 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 OR8B12Q8NGG6 310 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 PPIL1Q9Y3C6 166 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 RGPD8O14715 1765 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-214ENST00000620676 PPIAL4EA0A075B759 164 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 CTSVO60911 334 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 SCTP09683 121 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 PPIAL4FP0DN26 164 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 EN2P19622 333 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-214ENST00000620676 CDKN3Q16667 212 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 C19orf48Q6RUI8 117 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 DSPPQ9NZW4 1301 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 TNFSF13O75888 250 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 MPZP25189 248 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 FSCN3Q9NQT6 498 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
VPS13D-214ENST00000620676 ALPK2Q86TB3 2170 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR2T8A6NH00 312 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 RBP4P02753 201 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 FCGR3AP08637 254 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 C1QL2Q7Z5L3 287 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR1F12Q8NHA8 337 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 H1FXQ92522 213 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 RNASE7Q9H1E1 156 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM160Q9NX00 188 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OBP2AQ9NY56 170 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TRAV8-6A0A0B4J262 113 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 MRPL33O75394 65 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 PPYP01298 95 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR51G1Q8NGK1 321 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 GPBAR1Q8TDU6 330 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 KCNS1Q96KK3 526 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CDK5RAP2Q96SN8 1893 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 BLACEA4D250 179 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 F5H697 171 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CRXO43186 299 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 IGLV3-25P01717 112 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 FOXK1P85037 733 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 GDE1Q9NZC3 331 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 COL14A1Q05707 1796 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 KDM3BQ7LBC6 1761 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TRBV5-7A0A0A0MS05 114 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 EPPINO95925 133 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 INSM1Q01101 510 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM252Q8N6L7 170 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 WDYHV1Q96HA8 205 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TAAR6Q96RI8 345 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 SCN11AQ9UI33 1791 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 KBTBD11O94819 623 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 ASAH2BP0C7U1 165 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 BEND2Q8NDZ0 799 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 A0A1B0GU03 582 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TAS2R45P59539 299 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 FAM231BA6NCW3 169 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TFF3Q07654 80 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR4C13Q8NGP0 309 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR10X1Q8NGY0 326 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 TIMM10BQ9Y5J6 103 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CRYBG1Q9Y4K1 1723 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 MED1Q15648 1581 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CXorf1O96002 111 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 LYZP61626 148 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 LYRM7Q5U5X0 104 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 C5orf24Q7Z6I8 188 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 NEUROG3Q9Y4Z2 214 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CTXN2P0C2S0 81 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CD24P25063 80 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 UBE2L3P68036 154 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 C5orf17Q8NAS9 161 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR13H1Q8NG92 308 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 A0A1B0GTI1 187 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 NCBP2LA6PVI3 153 aaKnown RBP4.36□□□□□ -1.71
VPS13D-214ENST00000620676 LHFPL2Q6ZUX7 228 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 DNASE2BQ8WZ79 361 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 LYRM4Q9HD34 91 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 CTXND1A0A1B0GTU2 59 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 hADV38S2A0JD32 116 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 HBZP02008 142 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR10D3Q8NH80 312 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 ASCL2Q99929 193 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 OR2W1Q9Y3N9 320 aa4.36□□□□□ -1.71
VPS13D-214ENST00000620676 ORM1P02763 201 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 LINC01555Q8NAE3 123 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 NT5CQ8TCD5 201 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 MYO18BQ8IUG5 2567 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 RPS11P62280 158 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS13D-214ENST00000620676 S1PR3Q99500 378 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 MMP25Q9NPA2 562 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 SSUH2Q9Y2M2 353 aa4.35□□□□□ -1.71
VPS13D-214ENST00000620676 TSSC4Q9Y5U2 329 aaPredicted RBP4.35□□□□□ -1.71
VPS13D-214ENST00000620676 K7ERJ3 54 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms