RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 AKR1E2Q96JD6 320 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 ABHD14AQ9BUJ0 271 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 RSRP1Q9BUV0 290 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 CLEC7AQ9BXN2 247 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 FXYD6Q9H0Q3 95 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 ALX4Q9H161 411 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-209ENST00000620393 C5orf66Q9H5L9 145 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 CCL28Q9NRJ3 127 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 HIF1ANQ9NWT6 349 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 ITGB1BP2Q9UKP3 347 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 VSIG4Q9Y279 399 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV2-26A0A0B4J1V2 119 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 A0A1W2PPE3 182 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 GPR31O00270 319 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 TOR1AO14656 332 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 HSD17B6O14756 317 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 RAB29O14966 203 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ARPC1BO15143 372 aaKnown RBP6.54□□□□□ -1.36
CPNE3-209ENST00000620393 SLC31A2O15432 143 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 PROP1O75360 226 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 TGFAP01135 160 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 IGLV1-47P01700 117 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 IGLV2-14P01704 120 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 RLN1P04808 185 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 PI3P19957 117 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 GNG10P50151 68 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 MECP2P51608 486 aaKnown RBP6.54□□□□□ -1.36
CPNE3-209ENST00000620393 DLX1P56177 255 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 DHODHQ02127 395 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 BAMBIQ13145 260 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 KIAA2026Q5HYC2 2103 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 DCAF12L2Q5VW00 463 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 NCR3LG1Q68D85 454 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 HCP5Q6MZN7 132 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 Q6ZNX1 250 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF818PQ6ZRF7 136 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 VMO1Q7Z5L0 202 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 SLC25A42Q86VD7 318 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 CMTM1Q8IZ96 169 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 CIARTQ8N365 385 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-209ENST00000620393 PNKDQ8N490 385 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 DRAM1Q8N682 238 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF645Q8N7E2 425 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ADAD2Q8NCV1 583 aaKnown RBP6.54□□□□□ -1.36
CPNE3-209ENST00000620393 BEND2Q8NDZ0 799 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 BVESQ8NE79 360 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 UPRTQ96BW1 309 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 TBX15Q96SF7 602 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 C20orf85Q9H1P6 137 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 IFI27L2Q9H2X8 130 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 SIRT7Q9NRC8 400 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 NUDT15Q9NV35 164 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 SDHAF2Q9NX18 166 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 PIPOXQ9P0Z9 390 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF221Q9UK13 617 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 C14orf166Q9Y224 244 aaKnown RBP6.54□□□□□ -1.36
CPNE3-209ENST00000620393 NOTCH2Q04721 2471 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 PDZD2O15018 2839 aa6.54□□□□□ -1.36
CPNE3-209ENST00000620393 CSMD2Q7Z408 3487 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ITPR2Q14571 2701 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 J3QLI3 93 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 MPPED1O15442 326 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 PEX14O75381 377 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 PGLYRP1O75594 196 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 DHFRP00374 187 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 IL5P05113 134 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ANXA7P20073 488 aaKnown RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 COX7A1P24310 79 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 S100GP29377 79 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 GPR12P47775 334 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 UBE2E1P51965 193 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 PIGPP57054 158 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 RAB25P57735 213 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 TAS2R31P59538 309 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 UBE2MP61081 183 aaKnown RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 RND3P61587 244 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 PRB3Q04118 309 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ABCA11PQ4W5N1 156 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 FAHD2BQ6P2I3 314 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 TMED4Q7Z7H5 227 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ODF3L1Q8IXM7 274 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 LYG1Q8N1E2 194 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ST6GALNAC6Q969X2 333 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 FAHD2AQ96GK7 314 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF251Q9BRH9 671 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 OR2D2Q9H210 308 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 AUP1Q9Y679 476 aa6.53□□□□□ -1.36
CPNE3-209ENST00000620393 CENPVL3A0A0U1RRI6 287 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 A6NJY4 79 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 LY6LH3BQJ8 138 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 BUB1B-PAK6H3BSN5 160 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 PRAF2O60831 178 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms