RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 SRMP19623 302 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 HTR2CP28335 458 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 RAB9AP51151 201 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 PLGLAQ15195 96 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 SPHARQ15513 63 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 TRAM1Q15629 374 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 HSD17B12Q53GQ0 312 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 OGFRL1Q5TC84 451 aaPredicted RBP9.28□□□□□ -0.92
UPF3B-204ENST00000619445 SVOPQ8N4V2 548 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 SCOCQ9UIL1 159 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
UPF3B-204ENST00000619445 WSB1Q9Y6I7 421 aa9.28□□□□□ -0.92
UPF3B-204ENST00000619445 RRHO14718 337 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 SLC22A1O15245 554 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 ARL6IP5O75915 188 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 GSTP1P09211 210 aaKnown RBP9.27□□□□□ -0.93
UPF3B-204ENST00000619445 GNAO1P09471 354 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 CD37P11049 281 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 ZBTB25P24278 435 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 PSMA1P25786 263 aaKnown RBP9.27□□□□□ -0.93
UPF3B-204ENST00000619445 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-204ENST00000619445 OR3A3P47888 321 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 ZNF880Q6PDB4 577 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 C6orf201Q7Z4U5 140 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 CEACAM19Q7Z692 300 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 HSF4Q9ULV5 492 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 WASHC3Q9Y3C0 194 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
UPF3B-204ENST00000619445 TMEM14DPA8MWL7 114 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 G3V318 75 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 OVOL1O14753 267 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 HSPA12AO43301 675 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 SPDEFO95238 335 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 UCHL1P09936 223 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 PSMD7P51665 324 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 KIAA0141Q14154 515 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-204ENST00000619445 AKIRIN2Q53H80 203 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 LAIR2Q6ISS4 152 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 CD200R1LQ6Q8B3 271 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 FAM131AQ6UXB0 335 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 LRRTM1Q86UE6 522 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 OR5AN1Q8NGI8 311 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 UFD1Q92890 307 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
UPF3B-204ENST00000619445 PRR25Q96S07 402 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 TSNAXQ99598 290 aaKnown RBP9.26□□□□□ -0.93
UPF3B-204ENST00000619445 CENPOQ9BU64 300 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 TMED9Q9BVK6 235 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 SLA2Q9H6Q3 261 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 C12orf4Q9NQ89 552 aa9.26□□□□□ -0.93
UPF3B-204ENST00000619445 LINC01619G3V211 115 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 H7C2Y5 167 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 LY86O95711 162 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ARSBP15848 533 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 SERPINB10P48595 397 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 CX3CL1P78423 397 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 MED22Q15528 200 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ECSCRQ19T08 205 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 OR10K2Q6IF99 312 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ZNF562Q6V9R5 426 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 FAM89BQ8N5H3 189 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 OR6Q1Q8NGQ2 317 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 SETD6Q8TBK2 473 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ABHD5Q8WTS1 349 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 PTX4Q96A99 478 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 PLGRKTQ9HBL7 147 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ISYNA1Q9NPH2 558 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 ZNF221Q9UK13 617 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
UPF3B-204ENST00000619445 A0A1W2PN81 502 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 PTGES3LE9PB15 166 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 H0YJW9 148 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 SLC17A2O00624 439 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 DIRAS3O95661 229 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 APOA2P02652 100 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 TFAP2AP05549 437 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
UPF3B-204ENST00000619445 OR8U9P0C7N5 309 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CT45A6P0DMU7 189 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CT45A5P0DMU8 189 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CT45A7P0DMV0 189 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CPEP16870 476 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CNTFRP26992 372 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CHRNA7P36544 502 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 HLA-DRB3P79483 266 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 QRFPP83859 136 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 TAGLNQ01995 201 aaKnown RBP9.24□□□□□ -0.93
UPF3B-204ENST00000619445 UNC119Q13432 240 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 ACTBL2Q562R1 376 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 C19orf54Q5BKX5 351 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms