RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KIR2DS1Q14954 304 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 CDNFQ49AH0 187 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 IDNKQ5T6J7 187 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 TGIF2LXQ8IUE1 241 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 C5orf56Q8N8D9 126 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 OR2AK2Q8NG84 335 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 CAPSLQ8WWF8 208 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 AKR1E2Q96JD6 320 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 CMTM3Q96MX0 182 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 NABP2Q9BQ15 211 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
NEK3-209ENST00000618856 PIPOXQ9P0Z9 390 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 OR1A1Q9P1Q5 309 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 MOB4Q9Y3A3 225 aa6.56□□□□□ -1.36
NEK3-209ENST00000618856 RAB29O14966 203 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 MOSP00540 346 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 LPLP06858 475 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 GSTT2P0CG29 244 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 GSTT2BP0CG30 244 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 CT45A6P0DMU7 189 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 CT45A5P0DMU8 189 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 CT45A7P0DMV0 189 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 CEACAM6P40199 344 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 OR3A3P47888 321 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 LSM3P62310 102 aaKnown RBP6.55□□□□□ -1.36
NEK3-209ENST00000618856 PITPNAQ00169 270 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 LSAMPQ13449 338 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 IGSF11Q5DX21 431 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 LYG1Q8N1E2 194 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 FAM71E2Q8N5Q1 922 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 OR2T10Q8NGZ9 312 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 SETD6Q8TBK2 473 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 IL1F10Q8WWZ1 152 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 EDARADDQ8WWZ3 215 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 NAA50Q9GZZ1 169 aaKnown RBP6.55□□□□□ -1.36
NEK3-209ENST00000618856 RDH8Q9NYR8 311 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 ZNF230Q9UIE0 474 aaPredicted RBP6.55□□□□□ -1.36
NEK3-209ENST00000618856 ZNF580Q9UK33 172 aa6.55□□□□□ -1.36
NEK3-209ENST00000618856 TMEM235A6NFC5 223 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 ST8SIA5O15466 376 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 XRCC3O43542 346 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 IGHG2P01859 326 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 TMEM11P17152 192 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 VBP1P61758 197 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 ABCA11PQ4W5N1 156 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 UBE2NLQ5JXB2 153 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 MOB3BQ86TA1 216 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 H1FOOQ8IZA3 346 aaPredicted RBP6.54□□□□□ -1.36
NEK3-209ENST00000618856 KLHDC1Q8N7A1 406 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 Q8N9W7 124 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
NEK3-209ENST00000618856 NPBQ8NG41 125 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 MRPL20Q9BYC9 149 aaKnown RBP6.54□□□□□ -1.36
NEK3-209ENST00000618856 AUNIPQ9H7T9 357 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 LIN7CQ9NUP9 197 aaKnown RBP6.54□□□□□ -1.36
NEK3-209ENST00000618856 ANAPC10Q9UM13 185 aa6.54□□□□□ -1.36
NEK3-209ENST00000618856 A0A075B6Q4 140 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 TRAV18A0A075B6X5 111 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 IGHV3-72A0A0B4J1Y9 119 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 OR5H14A6NHG9 310 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 ADARB2-AS1A8MUL3 147 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 H0YJW9 148 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 TUSC2O75896 110 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 NDUFA3O95167 84 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 CTXN2P0C2S0 81 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 TALDO1P37837 337 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 VDAC2P45880 294 aaPredicted RBP6.53□□□□□ -1.36
NEK3-209ENST00000618856 F2RL1P55085 397 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 MRPS15P82914 257 aaKnown RBP6.53□□□□□ -1.36
NEK3-209ENST00000618856 ARFRP1Q13795 201 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 TMEM95Q3KNT9 176 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 RPL39P5Q59GN2 51 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 TCTEX1D4Q5JR98 221 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 GPR107Q5VW38 600 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 CNIH2Q6PI25 160 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 HOGA1Q86XE5 327 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 OR10J5Q8NHC4 309 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 NUDCD2Q8WVJ2 157 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 ACOT12Q8WYK0 555 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 MAFIPQ8WZ33 124 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 S100A16Q96FQ6 103 aaKnown RBP6.53□□□□□ -1.36
NEK3-209ENST00000618856 C5orf30Q96GV9 206 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 RITA1Q96K30 269 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 S1PR3Q99500 378 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 RNF5Q99942 180 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 BCL7BQ9BQE9 202 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
NEK3-209ENST00000618856 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
NEK3-209ENST00000618856 HSPA12AO43301 675 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 IGLV2-14P01704 120 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 HLA-DQB1P01920 261 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 APOA1P02647 267 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 IGF1P05019 195 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 NAT1P18440 290 aa6.52□□□□□ -1.37
NEK3-209ENST00000618856 MC5RP33032 325 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms