RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GALMQ96C23 342 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 OR2V2Q96R30 315 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 NCOR1P1Q9H4R4 102 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 TMEM218A2RU14 115 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 MUC1P15941 1255 aaPredicted RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 GPX4P36969 197 aaPredicted RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 CASP6P55212 293 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 TMEM267Q0VDI3 215 aaPredicted RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 PRR30Q53SZ7 412 aaPredicted RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 TMEM252Q8N6L7 170 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 TMEM171Q8WVE6 324 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 ABHD14BQ96IU4 210 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 TLNRD1Q9H1K6 362 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 MLXQ9UH92 298 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 WASF3Q9UPY6 502 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 A0A1B0GV90 55 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 H7C2Y5 167 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 RAMP3O60896 148 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 KRASP01116 189 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 CRYABP02511 175 aaKnown RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
CIITA-212ENST00000618207 HEXAP06865 529 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 KITLGP21583 273 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 SULT1A2P50226 295 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 EDDM3BP56851 147 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 RUNX1Q01196 453 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 SSX2Q16385 188 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 OR5D13Q8NGL4 314 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
CIITA-212ENST00000618207 ZNF729A6NN14 1252 aaPredicted RBP10.4□□□□□ -0.74
CIITA-212ENST00000618207 CAMLGP49069 296 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 DYNLT3P51808 116 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 EIF2S3LQ2VIR3 472 aaKnown RBP10.4□□□□□ -0.74
CIITA-212ENST00000618207 SMIM21Q3B7S5 101 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 ZCCHC24Q8N2G6 241 aaKnown RBP10.4□□□□□ -0.74
CIITA-212ENST00000618207 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 NINJ1Q92982 152 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 ABHD14AQ9BUJ0 271 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 NIT2Q9NQR4 276 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 MBNL3Q9NUK0 354 aaKnown RBP10.4□□□□□ -0.74
CIITA-212ENST00000618207 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.74
CIITA-212ENST00000618207 MIDNQ504T8 468 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 GPR157Q5UAW9 335 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 ITLN1Q8WWA0 313 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 SMIM8Q96KF7 97 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 MIOXQ9UGB7 285 aa10.4□□□□□ -0.74
CIITA-212ENST00000618207 ARFGEF3Q5TH69 2177 aa10.4□□□□□ -0.75
CIITA-212ENST00000618207 GPR37O15354 613 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 GAPDHP04406 335 aaKnown RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 ACAA1P09110 424 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 FBP1P09467 338 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 PRDX2P32119 198 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 KLF3P57682 345 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 RPS16P62249 146 aaKnown RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 ZNF585BQ52M93 769 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 TIMM23BQ5SRD1 257 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 FAM213BQ8TBF2 198 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 WIPI2Q9Y4P8 454 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 C9JQL5 133 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 IGKV1-5P01602 117 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 RPL30P62888 115 aaKnown RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 HMGN3Q15651 99 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 MBNL2Q5VZF2 373 aaKnown RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 WFDC8Q8IUA0 241 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 TGIF2LYQ8IUE0 185 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 PUSL1Q8N0Z8 303 aaKnown RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 PLEKHF2Q9H8W4 249 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 FAM212BQ9NTI7 297 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 UQCC1Q9NVA1 299 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 PSG11Q9UQ72 335 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 TXNL1O43396 289 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 EIF3GO75821 320 aaKnown RBP eCLIP10.39□□□□□ -0.75
CIITA-212ENST00000618207 ATG12O94817 140 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 TSPAN15O95858 294 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 G6PCP35575 357 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 ID3Q02535 119 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 DUX4L9Q6RFH8 374 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 SPACA3Q8IXA5 215 aa10.39□□□□□ -0.75
CIITA-212ENST00000618207 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 NKX6-2Q9C056 277 aaPredicted RBP10.39□□□□□ -0.75
CIITA-212ENST00000618207 SPTBN1Q01082 2364 aaKnown RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 HCFC1P51610 2035 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 DNASE2O00115 360 aaPredicted RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 FAM87AP0C7U9 286 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 PPT1P50897 306 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 SLC25A24Q6NUK1 477 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 GFRALQ6UXV0 394 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms