RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IGHV1-69DA0A0B4J2H0 117 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 C5orf63A6NC05 138 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 ANXA2P2A6NMY6 339 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 H3BN98 237 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 GNGT2O14610 69 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 DFFBO76075 338 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 KDM4BO94953 1096 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 CST4P01036 141 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 IGHV1-69P01742 117 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 RPA2P15927 270 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 GZMHP20718 246 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 HTR2CP28335 458 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 GLP1RP43220 463 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 CX3CR1P49238 355 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 PPT1P50897 306 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 HOXA4Q00056 320 aaPredicted RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 PLA2G7Q13093 441 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 EIF2B1Q14232 305 aaKnown RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 AKR1C8PQ5T2L2 129 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 TRIQKQ629K1 86 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 NCR3LG1Q68D85 454 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 TMEM88Q6PEY1 159 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 KCTD18Q6PI47 426 aaPredicted RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 SSX6Q7RTT6 188 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 SLC16A9Q7RTY1 509 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 SLC36A1Q7Z2H8 476 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 H1FOOQ8IZA3 346 aaPredicted RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 GCSAMQ8N6F7 178 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 BOLLQ8N9W6 283 aaKnown RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 OR56B1Q8NGI3 324 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 OR10R2Q8NGX6 335 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 OR8S1Q8NH09 359 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 CANT1Q8WVQ1 401 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 RNFT2Q96EX2 444 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 PHYHIPLQ96FC7 376 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 REEP6Q96HR9 211 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 OR8B4Q96RC9 309 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 ABCG5Q9H222 651 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 VCX2Q9H322 139 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 KPTNQ9Y664 436 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 TMEM14AQ9Y6G1 99 aa7.02□□□□□ -1.29
GPC6-202ENST00000617456 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
GPC6-202ENST00000617456 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ZNF816-ZNF321PA0A0X1KG74 233 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 hCG_38984A0A1B0GV85 526 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 FAM240BA0A1B0GVZ2 78 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR11H12B2RN74 326 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 F8WDY8 70 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 G3V3Q6 166 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 SMLR1H3BR10 107 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 K7ERU9 68 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 GPR31O00270 319 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 EI24O14681 340 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 SOX14O95416 240 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 GCGP01275 180 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 GYPBP06028 91 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ANXA2P07355 339 aaKnown RBP7.01□□□□□ -1.29
GPC6-202ENST00000617456 H2BFMP0C1H6 154 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 MMP9P14780 707 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 BRS3P32247 399 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 IER3P46695 156 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ROM1Q03395 351 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 GINS1Q14691 196 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 PTGES3Q15185 160 aaKnown RBP7.01□□□□□ -1.29
GPC6-202ENST00000617456 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 SAMD5Q5TGI4 173 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ZNF691Q5VV52 312 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 C11orf53Q8IXP5 236 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 LYG1Q8N1E2 194 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 C11orf44Q8N8P7 122 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ZSCAN4Q8NAM6 433 aaPredicted RBP7.01□□□□□ -1.29
GPC6-202ENST00000617456 LY6G5BQ8NDX9 201 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR11H1Q8NG94 326 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR11H7Q8NGC8 314 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR11H2Q8NH07 326 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR2AE1Q8NHA4 323 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 ASB17Q8WXJ9 295 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 PPP1R14AQ96A00 147 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 MICU1Q9BPX6 476 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 SULT4A1Q9BR01 284 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 C20orf85Q9H1P6 137 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 C16orf95Q9H693 158 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 CNTD2Q9H8S5 307 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 SLC25A19Q9HC21 320 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 C1orf123Q9NWV4 160 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OR14J1Q9UGF5 321 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 OAZ3Q9UMX2 235 aa7.01□□□□□ -1.29
GPC6-202ENST00000617456 TET2Q6N021 2002 aaPredicted RBP7.01□□□□□ -1.29
GPC6-202ENST00000617456 PLXNB1O43157 2135 aa7□□□□□ -1.29
GPC6-202ENST00000617456 DHRS7CA6NNS2 312 aa7□□□□□ -1.29
GPC6-202ENST00000617456 MCRIP1C9JLW8 97 aa7□□□□□ -1.29
GPC6-202ENST00000617456 ADAM20O43506 726 aa7□□□□□ -1.29
GPC6-202ENST00000617456 BRI3O95415 125 aa7□□□□□ -1.29
GPC6-202ENST00000617456 TSPAN13O95857 204 aa7□□□□□ -1.29
GPC6-202ENST00000617456 OR5AC1P0C628 307 aa7□□□□□ -1.29
GPC6-202ENST00000617456 ALOX5APP20292 161 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms