RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GATA4P43694 442 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 CYCSP99999 105 aaKnown RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 ZNF816Q0VGE8 651 aaPredicted RBP6.47□□□□□ -1.37
NEK3-207ENST00000617054 Q6ZRM9 215 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ACOT7LQ6ZUV0 252 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 MUC15Q8N387 334 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 OR10Z1Q8NGY1 313 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 SNX22Q96L94 193 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 GAFA1Q96PS6 74 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 SUCNR1Q9BXA5 334 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 ZC4H2Q9NQZ6 224 aa6.47□□□□□ -1.37
NEK3-207ENST00000617054 SLC31A2O15432 143 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 COL8A2P25067 703 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 APOBEC3AP31941 199 aaPredicted RBP6.46□□□□□ -1.37
NEK3-207ENST00000617054 POLR2GP62487 172 aaKnown RBP eCLIP6.46□□□□□ -1.37
NEK3-207ENST00000617054 TFF3Q07654 80 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 STUMQ69YW2 141 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 C1orf229Q6ZS94 237 aaPredicted RBP6.46□□□□□ -1.37
NEK3-207ENST00000617054 BVESQ8NE79 360 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 UBQLN2Q9UHD9 624 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 RNF115Q9Y4L5 304 aa6.46□□□□□ -1.37
NEK3-207ENST00000617054 DSCAML1Q8TD84 2053 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 NBPF19A0A087WUL8 3843 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 A0A1W2PPR1 153 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 C19orf84I3L1E1 186 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 MGST3O14880 152 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 CLDN14O95500 239 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 CDS2O95674 445 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 SERPINE2P07093 398 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 TNFRSF1AP19438 455 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 RPL39P5Q59GN2 51 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 PRSS54Q6PEW0 395 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 TMEM65Q6PI78 240 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 ZNF767PQ75MW2 155 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 MOB1BQ7L9L4 216 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 KCNRGQ8N5I3 272 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 LRRK2Q5S007 2527 aa6.46□□□□□ -1.38
NEK3-207ENST00000617054 KANTRA0A1W2PQU2 76 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 LINC00473A8K010 186 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 K7EPK0 472 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 PROP1O75360 226 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 KRASP01116 189 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 GNG10P50151 68 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 P2RX3P56373 397 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 Q3ZCU0 254 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 TCF23Q7RTU1 214 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 FAM71E2Q8N5Q1 922 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 CXorf58Q96LI9 332 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 TMEM106BQ9NUM4 274 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 HCFC1P51610 2035 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 C17orf98A8MV24 154 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 H3BP45 60 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 TMEM178BH3BS89 294 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 SPINT2O43291 252 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 IFNA7P01567 189 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 CCL3L1P16619 93 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 BRWD1-AS2P59051 145 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 NHLH2Q02577 135 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 RNASE11Q8TAA1 199 aaKnown RBP6.45□□□□□ -1.38
NEK3-207ENST00000617054 H1FXQ92522 213 aaKnown RBP6.45□□□□□ -1.38
NEK3-207ENST00000617054 RBPMSQ93062 196 aaKnown RBP6.45□□□□□ -1.38
NEK3-207ENST00000617054 ERGIC1Q969X5 290 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 AGMATQ9BSE5 352 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 NARFLQ9H6Q4 476 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 WNK2Q9Y3S1 2297 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 PPIAL4EA0A075B759 164 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 PPIAL4DF5H284 164 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 SSSCA1O60232 199 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 DEDDO75618 318 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 PPIAL4FP0DN26 164 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 HKR1P10072 659 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 UCP1P25874 307 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 G6PCP35575 357 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ZNF273Q14593 569 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 C17orf58Q2M2W7 97 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 MORN2Q502X0 79 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 AVPI1Q5T686 147 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ZNF788Q6ZQV5 615 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ZNF561Q8N587 486 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 FAM222BQ8WU58 562 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 LURAP1Q96LR2 239 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 TMEM56Q96MV1 263 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 EGLN1Q9GZT9 426 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 ZNF665Q9H7R5 613 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 C19orf12Q9NSK7 152 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 SDHAF2Q9NX18 166 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 CALYQ9NYX4 217 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
NEK3-207ENST00000617054 PPIAL4AQ9Y536 164 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 RFNGQ9Y644 331 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 TMEM56-RWDD3S4R434 201 aa6.45□□□□□ -1.38
NEK3-207ENST00000617054 A0A0D9SG52 128 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 RPS10-NUDT3A0A1W2PQS6 291 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 LRRC30A6NM36 301 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 OR2F2O95006 317 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SOD3P08294 240 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms