RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
TARDBP-217ENST00000616545 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
TARDBP-217ENST00000616545 TBL2Q9Y4P3 447 aaKnown RBP9.51□□□□□ -0.89
TARDBP-217ENST00000616545 CREBBPQ92793 2442 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 BAHCC1Q9P281 2608 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 ODF3BA8MYP8 253 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 LEUTXA8MZ59 168 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 OOSP1A8MZH6 123 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 TXNL1O43396 289 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 CD5LO43866 347 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 PRAF2O60831 178 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 HTR1DP28221 377 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 GNG10P50151 68 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 ZNF134P52741 427 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 LGALS4P56470 323 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
TARDBP-217ENST00000616545 GPR157Q5UAW9 335 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 CCBE1Q6UXH8 406 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-217ENST00000616545 ZNF66Q6ZN08 573 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 KCTD9Q7L273 389 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 CENPSQ8N2Z9 138 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 PNKDQ8N490 385 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 TCTEX1D1Q8N7M0 179 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 MRGPRFQ96AM1 343 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 HSD17B10Q99714 261 aaKnown RBP9.5□□□□□ -0.89
TARDBP-217ENST00000616545 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 OR2D2Q9H210 308 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 FAM212BQ9NTI7 297 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-217ENST00000616545 NUDT15Q9NV35 164 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 KCNS2Q9ULS6 477 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 CCDC168Q8NDH2 2452 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 MED13LQ71F56 2210 aa9.5□□□□□ -0.89
TARDBP-217ENST00000616545 TACC2O95359 2948 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 IGKV1D-13A0A0B4J2D9 117 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 RNASEK-C17orf49H0YIS7 233 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 BUB1B-PAK6H3BSN5 160 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 PEX14O75381 377 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 DHFRP00374 187 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 ARG1P05089 322 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 H2AFB2P0C5Z0 115 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 IGKV1-13P0DP09 117 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 HOXB4P17483 251 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-217ENST00000616545 EPHA1P21709 976 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 CATR1Q13166 79 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 HCP5Q6MZN7 132 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 CCDC144NLQ6NUI1 221 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 LYG1Q8N1E2 194 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 DRAM1Q8N682 238 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 CD300LFQ8TDQ1 290 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 RTBDNQ9BSG5 229 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-217ENST00000616545 PARP12Q9H0J9 701 aaKnown RBP9.49□□□□□ -0.89
TARDBP-217ENST00000616545 C5orf66Q9H5L9 145 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 DPM3Q9P2X0 92 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 VSIG4Q9Y279 399 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 KCNIP3Q9Y2W7 256 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 YLPM1P49750 1951 aaKnown RBP9.49□□□□□ -0.89
TARDBP-217ENST00000616545 ITPR2Q14571 2701 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.49□□□□□ -0.892e-9■■■■■ 44.5
TARDBP-217ENST00000616545 PDZD2O15018 2839 aa9.49□□□□□ -0.89
TARDBP-217ENST00000616545 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 INMT-MINDY4F8WBC2 141 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 SMAD7O15105 426 aaKnown RBP9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ARPC1BO15143 372 aaKnown RBP9.48□□□□□ -0.89
TARDBP-217ENST00000616545 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 GAPDHP04406 335 aaKnown RBP9.48□□□□□ -0.89
TARDBP-217ENST00000616545 RLN1P04808 185 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 IL5P05113 134 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 COX7A1P24310 79 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ARHGDIBP52566 201 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 PIGPP57054 158 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ZNF833PQ6ZTB9 187 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 SLC25A42Q86VD7 318 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 LDLRAD3Q86YD5 345 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 SGPP2Q8IWX5 399 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ODF3L1Q8IXM7 274 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 CIARTQ8N365 385 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-217ENST00000616545 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 NANPQ8TBE9 248 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 RTN4IP1Q8WWV3 396 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-217ENST00000616545 LEAP2Q969E1 77 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 LHX4Q969G2 390 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 ST6GALNAC6Q969X2 333 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 TMEM160Q9NX00 188 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 RNF150Q9ULK6 438 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 CR1P17927 2039 aa9.48□□□□□ -0.89
TARDBP-217ENST00000616545 SAA2-SAA4A0A096LPE2 208 aa9.47□□□□□ -0.89
TARDBP-217ENST00000616545 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
TARDBP-217ENST00000616545 CRYM-AS1A6NIL9 109 aa9.47□□□□□ -0.89
TARDBP-217ENST00000616545 LY6LH3BQJ8 138 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms