RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NTF4P34130 210 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 NCR3LG1Q68D85 454 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 RSG1Q9BU20 258 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 SH3BGRL3Q9H299 93 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 ODAMA1E959 279 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 CD3EP07766 207 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 DRAM1Q8N682 238 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 MDS2Q8NDY4 140 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 CA5BP1Q8WTZ4 195 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 LRFN3Q9BTN0 628 aa11.21□□□□□ -0.61
PPP4R3B-206ENST00000616407 IGKV1D-13A0A0B4J2D9 117 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF737O75373 536 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 IGKV1-13P0DP09 117 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 NQO2P16083 231 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 HNF1AP20823 631 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 SSTR5P35346 364 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR51I2Q9H344 312 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 LYRM2Q9NU23 88 aaPredicted RBP11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 HEATR1Q9H583 2144 aaKnown RBP11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 IL18BPO95998 194 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 FAM27E3Q08E93 113 aa11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 MRPL30Q8TCC3 161 aaKnown RBP11.21□□□□□ -0.62
PPP4R3B-206ENST00000616407 FAM74A7A6NL05 159 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 GYPAP02724 150 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR5G3P0C626 314 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF645Q8N7E2 425 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPP5D1E7EU14 171 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 RSPO1Q2MKA7 263 aaPredicted RBP11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 C1orf147Q96MC9 270 aaPredicted RBP11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 HOXD4P09016 255 aaPredicted RBP11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 TMEM42Q69YG0 159 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 C5orf24Q7Z6I8 188 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 SNX22Q96L94 193 aa11.2□□□□□ -0.62
PPP4R3B-206ENST00000616407 C12orf77C9JDV5 145 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 MMP9P14780 707 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNRF1Q8ND25 227 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 ADTRPQ96IZ2 230 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 UCP1P25874 307 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 KIR2DS2P43631 304 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 CDC34P49427 236 aaPredicted RBP11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 RPL31P62899 125 aaKnown RBP11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 FOXF2Q12947 444 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 SPSB4Q96A44 273 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 SH2D2AQ9NP31 389 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 TRAV24A0A0B4J272 114 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 IGHV2OR16-5A0A0B4J2B6 119 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF273Q14593 569 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 LY86O95711 162 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 TIMM23BQ5SRD1 257 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 IL22RA2Q969J5 263 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 MS4A5Q9H3V2 200 aa11.19□□□□□ -0.62
PPP4R3B-206ENST00000616407 DENND4AQ7Z401 1863 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 C1QTNF12Q5T7M4 302 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR13D1Q8NGV5 346 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 LHFPL5Q8TAF8 219 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 RNF138Q8WVD3 245 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 KCNMB2Q9Y691 235 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 A0A1W2PPQ1 181 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 A8MXK9 166 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 IQCF6A8MYZ5 107 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 LILRA1O75019 489 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 DKK1O94907 266 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 CYB5R3P00387 301 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 NPBWR1P48145 328 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 VMA21Q3ZAQ7 101 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 ALPK3Q96L96 1907 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 IGSF23A1L1A6 192 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 COX7A1P24310 79 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 GLRXP35754 106 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 TAS2R45P59539 299 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 USF2Q15853 346 aaPredicted RBP11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 ABHD14AQ9BUJ0 271 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 SFXN3Q9BWM7 321 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 TUBD1Q9UJT1 453 aa11.18□□□□□ -0.62
PPP4R3B-206ENST00000616407 CDK2AP1O14519 115 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 S1PR2O95136 353 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PGA5P0DJD9 388 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms