RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CTXN2	P0C2S0	81 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	UCP1	P25874	307 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	S100G	P29377	79 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	NMS	Q5H8A3	153 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TMEM108	Q6UXF1	575 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390		Q6ZS49	121 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	FDCSP	Q8NFU4	85 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	GPR146	Q96CH1	333 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	RYDEN	Q9NUL5	291 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SMG1	Q96Q15	3661 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OTOGL	Q3ZCN5	2332 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390		J3QT63	122 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	WNT9B	O14905	357 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PAX6	P26367	422 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	HAGH	Q16775	308 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	AWAT1	Q58HT5	328 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OR10V1	Q8NGI7	309 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LYRM2	Q9NU23	88 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TAAR3P	Q9P1P4	343 aa		11.76	□□□□□ -0.53
CACNA1C-231	ENST00000616390	UMAD1	C9J7I0	102 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	CEACAM6	P40199	344 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZNF266	Q14584	549 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390		Q6P435	159 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390		Q6ZRM9	215 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	DEFB124	Q8NES8	71 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SLC25A31	Q9H0C2	315 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390		A6NLC8	198 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZNF14	P17017	642 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	MPV17	P39210	176 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TNFSF10	P50591	281 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	RND3	P61587	244 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PSG7	Q13046	419 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OR8G1	Q15617	311 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ODF3L1	Q8IXM7	274 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LYPD6B	Q8NI32	183 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SLC35D1	Q9NTN3	355 aa		11.75	□□□□□ -0.53
CACNA1C-231	ENST00000616390	CHD3	Q12873	2000 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ARG1	P05089	322 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	FABP6	P51161	128 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	VWA1	Q6PCB0	445 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	OR5D13	Q8NGL4	314 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	KCNJ16	Q9NPI9	418 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	CACNG5	Q9UF02	275 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	KPTN	Q9Y664	436 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390		H0Y980	276 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ATXN7	O15265	892 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	UCP2	P55851	309 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ID3	Q02535	119 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TGFBR3	Q03167	851 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TPRX1	Q8N7U7	411 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	GP6	Q9HCN6	339 aa		11.74	□□□□□ -0.53
CACNA1C-231	ENST00000616390	C7orf77	A4D0Y5	90 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	C5orf52	A6NGY3	159 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	NPS	P0C0P6	89 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	DDT	P30046	118 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	USF2	Q15853	346 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	AVPI1	Q5T686	147 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LOXL4	Q96JB6	756 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	C11orf1	Q9H5F2	150 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	MSL2	Q9HCI7	577 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PITX3	O75364	302 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	THNSL2	Q86YJ6	484 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PLPPR2	Q96GM1	343 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PKIB	Q9C010	78 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	STRAP	Q9Y3F4	350 aa	Known RBP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390		K7N7A8	449 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	METTL15P1	P0C7V9	234 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PAX9	P55771	341 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	AES	Q08117	197 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	TESK1	Q15569	626 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	KLF14	Q8TD94	323 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SCRT1	Q9BWW7	348 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	ZDHHC11	Q9H8X9	412 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SMCO4	Q9NRQ5	59 aa		11.73	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LRP5L	A4QPB2	252 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	COLCA2	A8K830	154 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	SH2D1B	O14796	132 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PSPN	O60542	156 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	IGKV1-39	P01597	117 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	IGKV1D-39	P04432	117 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	WT1	P19544	449 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	FOXF2	Q12947	444 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PRAMEF6	Q5VXH4	476 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LINC00596	Q86U02	117 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PACRG	Q96M98	296 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	PBDC1	Q9BVG4	233 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390		A0A087X0M5	115 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390		A0A1B0GX30	115 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390		A0A1W2PPH5	198 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	CXorf65	A6NEN9	183 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390		M0QZK8	103 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	IGLV2-14	P01704	120 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	LTC4S	Q16873	150 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	AKR1C8P	Q5T2L2	129 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	FAM214B	Q7L5A3	538 aa		11.72	□□□□□ -0.53
CACNA1C-231	ENST00000616390	RSG1	Q9BU20	258 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms