RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	LRRC61	Q9BV99	259 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	RPH3AL	Q9UNE2	315 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	DOCK7	Q96N67	2140 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	G6PC	P35575	357 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	LDLRAD2	Q5SZI1	272 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	SLC25A47	Q6Q0C1	308 aa		13.41	□□□□□ -0.26
SYNRG-223	ENST00000616179	PIGBOS1	A0A0B4J2F0	54 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	IGHM	P01871	453 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	FABP6	P51161	128 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	IGLV3-21	P80748	117 aa	Predicted RBP	13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	ACTL10	Q5JWF8	245 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	ZNF525	Q8N782	197 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	SSMEM1	Q8WWF3	244 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179		A6NCN8	305 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	RNF212B	A8MTL3	300 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	MAJIN	Q3KP22	176 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	YRDC	Q86U90	279 aa	Known RBP	13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	VASH2	Q86V25	355 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	PLXDC1	Q8IUK5	500 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	ZNF837	Q96EG3	531 aa	Predicted RBP	13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	IL36RN	Q9UBH0	155 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179		A0A1B0GX78	115 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	DUX1	O43812	170 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	PRR27	Q6MZM9	219 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	LRTM2	Q8N967	370 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	SLC24A4	Q8NFF2	622 aa		13.4	□□□□□ -0.26
SYNRG-223	ENST00000616179	TMEM250	H0YL14	139 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGKV3-11	P04433	115 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	CEACAM8	P31997	349 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	ARL16	Q0P5N6	197 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	ZNF726P1	Q15940	193 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	CEACAM16	Q2WEN9	425 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179		A0A0G2JRQ6	117 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	FXYD3	Q14802	87 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	SFRP2	Q96HF1	295 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	LRRK1	Q38SD2	2015 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	GTF3C1	Q12789	2109 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	C5orf49	A4QMS7	147 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	TOX3	O15405	576 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	CEACAM6	P40199	344 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	TMEM147	Q9BVK8	224 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	LIN7C	Q9NUP9	197 aa	Known RBP	13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179		A0A0U1RQV5	110 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179		M0QZ24	198 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	CAMP	P49913	170 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	PRR31	Q5SQ13	230 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	SLC22A18AS	Q8N1D0	253 aa		13.39	□□□□□ -0.27
SYNRG-223	ENST00000616179	PCNX3	Q9H6A9	2034 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGKV1-12	A0A0C4DH73	117 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGKV1D-12	P01611	117 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	CD99	P14209	185 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	DRD1	P21728	446 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	TCTA	P57738	103 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	LRRC75B	Q2VPJ9	315 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	STPG4	Q8N801	248 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	CA6	P23280	308 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	MSX1	P28360	303 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	MRPS11	P82912	194 aa	Known RBP	13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	PLP2	Q04941	152 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	TFF3	Q07654	80 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	RPEL1	Q2QD12	228 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179		Q6ZWC4	215 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	ANKRD30BL	A7E2S9	258 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	TMEM92	Q6UXU6	159 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	WNT5B	Q9H1J7	359 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	ENY2	Q9NPA8	101 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	IL23A	Q9NPF7	189 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	ANAPC10	Q9UM13	185 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	OR2W1	Q9Y3N9	320 aa		13.38	□□□□□ -0.27
SYNRG-223	ENST00000616179	SH2D1B	O14796	132 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	MT-CO2	P00403	227 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	KIR2DL1	P43626	348 aa	Predicted RBP	13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	TIGIT	Q495A1	244 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	GCSAML	Q5JQS6	135 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	OR1A1	Q9P1Q5	309 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	DPRX	A6NFQ7	191 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179		H0Y980	276 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	UCP1	P25874	307 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	SRI	P30626	198 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	SOX8	P57073	446 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	KLF3	P57682	345 aa	Predicted RBP	13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	ACSM6	Q6P461	480 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGKV1-27	A0A075B6S5	117 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179		M0R2Z0	102 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGHV3-13	P01766	116 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGHV3-7	P01780	117 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	TNFRSF4	P43489	277 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	LCN2	P80188	198 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	SPATA46	Q5T0L3	261 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	LCN12	Q6JVE5	192 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	TMEM56	Q96MV1	263 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	RNF2	Q99496	336 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	MRPL13	Q9BYD1	178 aa	Known RBP	13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	NRN1	Q9NPD7	142 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	CLDN16	Q9Y5I7	305 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	TMEM56-RWDD3	S4R434	201 aa		13.37	□□□□□ -0.27
SYNRG-223	ENST00000616179	MKI67	P46013	3256 aa	Known RBP	13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179		A0A1W2PQF6	199 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms