RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CASTOR1Q8WTX7 329 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 DLX4Q92988 240 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 NICN1Q9BSH3 213 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 TMEM59Q9BXS4 323 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 FBXL15Q9H469 300 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 PLCXD1Q9NUJ7 323 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 STEAP1Q9UHE8 339 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 EBAG9O00559 213 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 SAP30O75446 220 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 CT45A6P0DMU7 189 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 CT45A5P0DMU8 189 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 CT45A7P0DMV0 189 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 HTR2CP28335 458 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 CRIP2P52943 208 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 UNC119Q13432 240 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 ACSM3Q53FZ2 586 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 ZNF880Q6PDB4 577 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 GLDNQ6ZMI3 551 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 BPIFB6Q8NFQ5 453 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 FBLIM1Q8WUP2 373 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 TOLLIPQ9H0E2 274 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 PARP12Q9H0J9 701 aaKnown RBP16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 PIPOXQ9P0Z9 390 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 SLC23A1Q9UHI7 598 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 ERGIC3Q9Y282 383 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 A3GALT2U3KPV4 340 aa16.07■□□□□ 0.16
TRAPPC3-208ENST00000616074 LINC01619G3V211 115 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 C3orf84H3BNL1 204 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 RRHO14718 337 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 RAB29O14966 203 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 NAPSAO96009 420 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 CX3CL1P78423 397 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 GABPB1Q06547 395 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 RBM48Q5RL73 367 aaKnown RBP16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 C1orf100Q5SVJ3 147 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 GLT8D1Q68CQ7 371 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 ZNF660Q6AZW8 331 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 SETD6Q8TBK2 473 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 TM2D1Q9BX74 207 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 CHMP1AQ9HD42 196 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 TPSG1Q9NRR2 321 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 FKBP14Q9NWM8 211 aa16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 FOXA2Q9Y261 457 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC3-208ENST00000616074 IGHV4OR15-8A0A075B7B6 117 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 A0A087WW49 117 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 H0YJW9 148 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 FCN1O00602 326 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 LGALS1P09382 135 aaKnown RBP16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 EGR2P11161 476 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 PLGLAQ15195 96 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 SBSPONQ8IVN8 264 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 ABHD14BQ96IU4 210 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 TMED9Q9BVK6 235 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 SACSQ9NZJ4 4579 aa16.05■□□□□ 0.16
TRAPPC3-208ENST00000616074 A0A0A6YYD4 124 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 OR5H14A6NHG9 310 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 SPNP16150 400 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 MS4A15Q8N5U1 240 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 TCTEX1D1Q8N7M0 179 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 KCNG3Q8TAE7 436 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 ABHD5Q8WTS1 349 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 PHYHIPQ92561 330 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 FAM103A1Q9BTL3 118 aaKnown RBP16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 GAB2Q9UQC2 676 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 NUBP2Q9Y5Y2 271 aa16.04■□□□□ 0.16
TRAPPC3-208ENST00000616074 TMEM14DPA8MWL7 114 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 SLC22A1O15245 554 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 GSTP1P09211 210 aaKnown RBP16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 SNRPBP14678 240 aaKnown RBP16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 QRFPP83859 136 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 RCN1Q15293 331 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 MOB1BQ7L9L4 216 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 OVCH2Q7RTZ1 564 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 ARPC1AQ92747 370 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 AGMATQ9BSE5 352 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 PLEKHJ1Q9NW61 149 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 OR1A1Q9P1Q5 309 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 WASHC3Q9Y3C0 194 aa16.03■□□□□ 0.16
TRAPPC3-208ENST00000616074 H7C2Y5 167 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 IGHV3-11P01762 117 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 GP9P14770 177 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 SRMP19623 302 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 MC5RP33032 325 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 TMEM267Q0VDI3 215 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 HSD17B12Q53GQ0 312 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 ACSM6Q6P461 480 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 CD200R1LQ6Q8B3 271 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 OR5AN1Q8NGI8 311 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 RCHY1Q96PM5 261 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 CLCC1Q96S66 551 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 HDHD3Q9BSH5 251 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 MND1Q9BWT6 205 aa16.02■□□□□ 0.16
TRAPPC3-208ENST00000616074 TRBV6-6A0A0A6YYG2 114 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 ITGB1BP1O14713 200 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 RBBP9O75884 186 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 CDK1P06493 297 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 FRMD6-AS1P0C7T7 363 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 CD37P11049 281 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 HLA-DRB3P79483 266 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 ACTBL2Q562R1 376 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms