RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 OR1L1Q8NH94 360 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
MSH6-213ENST00000614496 TMEM147Q9BVK8 224 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 TRAPPC1Q9Y5R8 145 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 C11orf94C9JXX5 98 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 M0R1X1 148 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 ID3Q02535 119 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 ZDHHC11Q9H8X9 412 aa10.7□□□□□ -0.7
MSH6-213ENST00000614496 KLF13Q9Y2Y9 288 aaPredicted RBP10.7□□□□□ -0.7
MSH6-213ENST00000614496 ACTL6BO94805 426 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 NTF4P34130 210 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 PMS2CLQ68D20 193 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 MOB1BQ7L9L4 216 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 NUFIP2Q7Z417 695 aaKnown RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 ARRDC1-AS1Q9H2J1 176 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 TUBG2Q9NRH3 451 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 PLSCR2Q9NRY7 297 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 PITPNC1Q9UKF7 332 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 MT-CO3P00414 261 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 ZNF385CQ66K41 422 aaPredicted RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 LINC00469Q8N7U9 141 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 MSL2Q9HCI7 577 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 PINLYPA6NC86 204 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 AQP7O14520 342 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 SLC25A40Q8TBP6 338 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 CIB3Q96Q77 187 aaPredicted RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 POLEQ07864 2286 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 TRGV5A0A0B4J1U4 118 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 A0A0G2JRQ6 117 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 A0A1B0GV90 55 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 AGFG2O95081 481 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 TMEM50AO95807 157 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 HAND1O96004 215 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 GYPAP02724 150 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 STARD6P59095 220 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 TMEM251Q8N6I4 163 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 IL22RA2Q969J5 263 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 UHRF2Q96PU4 802 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 FAM103A1Q9BTL3 118 aaKnown RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 C1QTNF5Q9BXJ0 243 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 TTTY12Q9BZ98 90 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 RYDENQ9NUL5 291 aaKnown RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 TREM2Q9NZC2 230 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 IL36GQ9NZH8 169 aa10.69□□□□□ -0.7
MSH6-213ENST00000614496 KLF2Q9Y5W3 355 aaPredicted RBP10.69□□□□□ -0.7
MSH6-213ENST00000614496 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 SERF2P84101 59 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 SSMEM1Q8WWF3 244 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 SIGLEC12Q96PQ1 595 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 LRRC3CA6NJW4 275 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 NDUFS6O75380 124 aaKnown RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 MT-CO2P00403 227 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 CD55P08174 381 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 DRAM1Q8N682 238 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 GATCO43716 136 aaKnown RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 ZG16O60844 167 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 DEFA4P12838 97 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 RNPS1Q15287 305 aaKnown RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 DHRS13Q6UX07 377 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 Q8IYB0 196 aa10.68□□□□□ -0.7
MSH6-213ENST00000614496 CISD1Q9NZ45 108 aaKnown RBP10.68□□□□□ -0.7
MSH6-213ENST00000614496 CTXND1A0A1B0GTU2 59 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 ETV2O00321 342 aaPredicted RBP10.67□□□□□ -0.7
MSH6-213ENST00000614496 PAX6P26367 422 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 DPPA3Q6W0C5 159 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 GGNQ86UU5 652 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 PILRBQ9UKJ0 227 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 SPTA1P02549 2419 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 LOC102723996A0A087X1L8 192 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 TNFSF15O95150 251 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 TFF1P04155 84 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 SELENOVP59797 346 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 PKIAP61925 76 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 HIST1H3AP68431 136 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
MSH6-213ENST00000614496 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 CTDSP1Q9GZU7 261 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms