RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 LGI3Q8N145 548 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF488Q96MN9 340 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 GPHA2Q96T91 129 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF665Q9H7R5 613 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 MTCH1Q9NZJ7 389 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 TRAV17A0A0B4J275 112 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 SYNGR1O43759 233 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 SS18L1O75177 396 aaPredicted RBP13.99□□□□□ -0.17
CNOT3-208ENST00000613073 CYB5R3P00387 301 aaPredicted RBP13.99□□□□□ -0.17
CNOT3-208ENST00000613073 IGHV1-2P23083 117 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 DYNLT3P51808 116 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 BPIFB3P59826 476 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 DMRTA1Q5VZB9 504 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 FAM90A2PQ658T7 463 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 LCN15Q6UWW0 184 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
CNOT3-208ENST00000613073 CDH20Q9HBT6 801 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 GLRX2Q9NS18 164 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 KIAA2026Q5HYC2 2103 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 NKX2-6A6NCS4 301 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 IGHG3P01860 377 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 CA6P23280 308 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 ELLP55199 621 aaPredicted RBP13.98□□□□□ -0.17
CNOT3-208ENST00000613073 NANOS1Q8WY41 292 aaKnown RBP13.98□□□□□ -0.17
CNOT3-208ENST00000613073 SLC2A9Q9NRM0 540 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 CLCF1Q9UBD9 225 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 RAB4AP20338 218 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 DTYMKP23919 212 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 ADIRFQ15847 76 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 IGFL2Q6UWQ7 119 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 LIAT1Q6ZQX7 453 aa13.98□□□□□ -0.17
CNOT3-208ENST00000613073 IGHV3-64DA0A0J9YX35 117 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 ANKRD30BLA7E2S9 258 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 HSPA12AO43301 675 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 GNG10P50151 68 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 RRP8O43159 456 aaKnown RBP13.97□□□□□ -0.17
CNOT3-208ENST00000613073 GCGP01275 180 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 CD33P20138 364 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 RND2P52198 227 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 UBE2NP61088 152 aaKnown RBP13.97□□□□□ -0.17
CNOT3-208ENST00000613073 VAMP2P63027 116 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 VWA1Q6PCB0 445 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 FAM214BQ7L5A3 538 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 R3HDM4Q96D70 268 aa13.97□□□□□ -0.17
CNOT3-208ENST00000613073 RIMS4Q9H426 269 aaPredicted RBP13.97□□□□□ -0.17
CNOT3-208ENST00000613073 TRAPPC2LH3BP13 241 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 H3BP45 60 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 TK1P04183 234 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 ERVFC1-1P60608 527 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 GNB2P62879 340 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF154Q13106 437 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 CXorf66Q5JRM2 361 aaPredicted RBP13.96□□□□□ -0.17
CNOT3-208ENST00000613073 SNIP1Q8TAD8 396 aaKnown RBP13.96□□□□□ -0.17
CNOT3-208ENST00000613073 FUT9Q9Y231 359 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 TRBV24-1A0A075B6N3 115 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 LOC102723971A0A1B0GUV8 181 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 A0A1W2PPQ1 181 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 PLA2G5P39877 138 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 TBC1D28Q2M2D7 210 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 TMEM252Q8N6L7 170 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 C9orf106Q8NAJ2 232 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 OR5P3Q8WZ94 311 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 EXTL1Q92935 676 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 TAAR6Q96RI8 345 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 DIRC2Q96SL1 478 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 ELOVL1Q9BW60 279 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 GP6Q9HCN6 339 aa13.96□□□□□ -0.17
CNOT3-208ENST00000613073 GTF3C1Q12789 2109 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 INTS1Q8N201 2190 aaKnown RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 A0A1B0GUS0 222 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 PROB1E7EW31 1015 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 GZMHP20718 246 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OR3A1P47881 315 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 TGFBR3Q03167 851 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 FOXF2Q12947 444 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 RTP5Q14D33 572 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 SLC25A24Q6NUK1 477 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 PRR18Q8N4B5 295 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OR5A2Q8NGI9 324 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 NEK7Q8TDX7 302 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 MSI2Q96DH6 328 aaKnown RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 TP53RKQ96S44 253 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OR2J1Q9GZK6 312 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 ZNF286AQ9HBT8 521 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 DLL3Q9NYJ7 618 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 ZNF705FA8MVS1 300 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 TM4SF5O14894 197 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OPN1MWP04001 364 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-208ENST00000613073 FGF12P61328 243 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 IQCJQ1A5X6 159 aa13.95□□□□□ -0.18
CNOT3-208ENST00000613073 ARSJQ5FYB0 599 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms