RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 SOCS1O15524 211 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 CPEP16870 476 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 RAB11BQ15907 218 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 PRSS48Q7RTY5 328 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 FAM89BQ8N5H3 189 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 GFI1Q99684 422 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 GHITMQ9H3K2 345 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 SLC23A1Q9UHI7 598 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 AK3Q9UIJ7 227 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 HSF4Q9ULV5 492 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 RAB26Q9ULW5 256 aa13.59□□□□□ -0.23
PRKN-209ENST00000612485 ITGB1BP1O14713 200 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 CRHBPP24387 322 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 CALRP27797 417 aaKnown RBP13.58□□□□□ -0.24
PRKN-209ENST00000612485 PSMB8P28062 276 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 NPBQ8NG41 125 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 OR5M8Q8NGP6 311 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 C4orf3Q8WVX3 66 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 RITA1Q96K30 269 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 MGLLQ99685 303 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 OR51J1Q9H342 316 aa13.58□□□□□ -0.24
PRKN-209ENST00000612485 ZBTB25P24278 435 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 CNTFRP26992 372 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 PSMD7P51665 324 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 HLA-DRB3P79483 266 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 DCTN2Q13561 401 aaKnown RBP13.57□□□□□ -0.24
PRKN-209ENST00000612485 LIN54Q6MZP7 749 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 TMEM65Q6PI78 240 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 EDARADDQ8WWZ3 215 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 ACOT13Q9NPJ3 140 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 C12orf4Q9NQ89 552 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 PARP11Q9NR21 331 aa13.57□□□□□ -0.24
PRKN-209ENST00000612485 IGHV7-81A0A0B4J1V7 117 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 FOXI3A8MTJ6 420 aaPredicted RBP13.56□□□□□ -0.24
PRKN-209ENST00000612485 ATP6V0E1O15342 81 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 HSPA12AO43301 675 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 NDUFA3O95167 84 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 PPIFP30405 207 aaKnown RBP13.56□□□□□ -0.24
PRKN-209ENST00000612485 MC5RP33032 325 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 CEACAM6P40199 344 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 MAP2K4P45985 399 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 VEGFCP49767 419 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 DGCR2P98153 550 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 FABP5Q01469 135 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 RPL39P5Q59GN2 51 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 FAM131AQ6UXB0 335 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 OR56B1Q8NGI3 324 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 FAM3DQ96BQ1 224 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 ARHGAP5-AS1Q96IT6 56 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 HDHD3Q9BSH5 251 aaPredicted RBP13.56□□□□□ -0.24
PRKN-209ENST00000612485 Q9N2K0 584 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 BLOC1S6Q9UL45 172 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 WSB1Q9Y6I7 421 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 V9GY05 133 aa13.56□□□□□ -0.24
PRKN-209ENST00000612485 TRAV41A0A0B4J266 112 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 G3V318 75 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 RAMP3O60896 148 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 CT45A6P0DMU7 189 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 CT45A5P0DMU8 189 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 CT45A7P0DMV0 189 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 TMEM50BP56557 158 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 CLDN12P56749 244 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 TBCEQ15813 527 aaPredicted RBP13.55□□□□□ -0.24
PRKN-209ENST00000612485 C2orf76Q3KRA6 126 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 C9orf66Q5T8R8 295 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 MYOZ3Q8TDC0 251 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 ABHD14BQ96IU4 210 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 UBE2E2Q96LR5 201 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 CMSS1Q9BQ75 279 aaKnown RBP13.55□□□□□ -0.24
PRKN-209ENST00000612485 PECRQ9BY49 303 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 OR1A1Q9P1Q5 309 aa13.55□□□□□ -0.24
PRKN-209ENST00000612485 H0YJW9 148 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
PRKN-209ENST00000612485 RBBP9O75884 186 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 IGLV1-40P01703 118 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 GSTP1P09211 210 aaKnown RBP13.54□□□□□ -0.24
PRKN-209ENST00000612485 FHL3Q13643 280 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 PLGLAQ15195 96 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 ZNF660Q6AZW8 331 aaPredicted RBP13.54□□□□□ -0.24
PRKN-209ENST00000612485 ZNF367Q7RTV3 350 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 OR11H1Q8NG94 326 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 RNF5Q99942 180 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 AGMATQ9BSE5 352 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
PRKN-209ENST00000612485 C11orf54Q9H0W9 315 aaPredicted RBP13.54□□□□□ -0.24
PRKN-209ENST00000612485 VSIG4Q9Y279 399 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 WASHC3Q9Y3C0 194 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
PRKN-209ENST00000612485 H7C2Y5 167 aa13.53□□□□□ -0.24
PRKN-209ENST00000612485 RRHO14718 337 aa13.53□□□□□ -0.24
PRKN-209ENST00000612485 PDCD5O14737 125 aa13.53□□□□□ -0.24
PRKN-209ENST00000612485 SCTP09683 121 aa13.53□□□□□ -0.24
PRKN-209ENST00000612485 MRPS15P82914 257 aaKnown RBP13.53□□□□□ -0.24
PRKN-209ENST00000612485 GLDNQ6ZMI3 551 aaPredicted RBP13.53□□□□□ -0.24
PRKN-209ENST00000612485 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
PRKN-209ENST00000612485 OR5AN1Q8NGI8 311 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms