RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PROB1E7EW31 1015 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
TCF3-220ENST00000611869 YIF1AO95070 293 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 FGF2P09038 288 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 SSTR5P35346 364 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 REG1BP48304 166 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 THBS3P49746 956 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 C9orf106Q8NAJ2 232 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 IGKV1-27A0A075B6S5 117 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 SNRPEP62304 92 aaKnown RBP11.2□□□□□ -0.62
TCF3-220ENST00000611869 TIGITQ495A1 244 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 A0A1W2PRD5 423 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 A0A1W2PRF3 423 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 A0A1W2PRM7 423 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 ODAMA1E959 279 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 SRSF10O75494 262 aaKnown RBP11.2□□□□□ -0.62
TCF3-220ENST00000611869 HLA-GP17693 338 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 OPRK1P41145 380 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 RPL31P62899 125 aaKnown RBP11.2□□□□□ -0.62
TCF3-220ENST00000611869 ZNF90Q03938 601 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 SSX2Q16385 188 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 LEAP2Q969E1 77 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 KIAA1456Q9P272 454 aa11.2□□□□□ -0.62
TCF3-220ENST00000611869 COL4A3Q01955 1670 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 E9PLN8 166 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 H0YIZ8 118 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 H0YL77 283 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 B3GALT5-AS1P59052 145 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 WDFY1Q8IWB7 410 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 ZNF251Q9BRH9 671 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 SSTP61278 116 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 KRTCAP3Q53RY4 240 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 MARS2Q96GW9 593 aaKnown RBP11.19□□□□□ -0.62
TCF3-220ENST00000611869 ADTRPQ96IZ2 230 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 PCDH15Q96QU1 1955 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 RPEQ96AT9 228 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 C12orf57Q99622 126 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
TCF3-220ENST00000611869 CLDN34H7C241 214 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 NPBWR1P48145 328 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 ZNRF1Q8ND25 227 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 RNF126Q9BV68 326 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 HEXA-AS1Q9H8Q6 139 aa11.19□□□□□ -0.62
TCF3-220ENST00000611869 LYRM2Q9NU23 88 aaPredicted RBP11.19□□□□□ -0.62
TCF3-220ENST00000611869 KIR2DS2P43631 304 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 UBE2G1P62253 170 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 SHANK1Q9Y566 2161 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 DHRS11Q6UWP2 260 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 DOK5Q9P104 306 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 OR10J4P0C629 311 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 RPS2P15880 293 aaKnown RBP11.18□□□□□ -0.62
TCF3-220ENST00000611869 ZNF273Q14593 569 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 C9orf152Q5JTZ5 239 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 BTF3L4Q96K17 158 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 RHOVQ96L33 236 aa11.18□□□□□ -0.62
TCF3-220ENST00000611869 IGKV1D-13A0A0B4J2D9 117 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 CYB5R3P00387 301 aaPredicted RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 MMP7P09237 267 aaPredicted RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 IGKV1-13P0DP09 117 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 CHRNA7P36544 502 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 FAM201AQ5SY85 155 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 SLC25A10Q9UBX3 287 aaPredicted RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 J3QW42 95 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 CDX4O14627 284 aaPredicted RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 QRFPP83859 136 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 HGFACQ04756 655 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PRR27Q6MZM9 219 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 MISP3Q96FF7 219 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 H3BQ15 152 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 S1PR2O95136 353 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms