RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	CHRNB4	P30926	498 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	SUCLG1	P53597	346 aa	Known RBP	11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	TPPP2	P59282	170 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	VAMP3	Q15836	100 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	RNASEK	Q6P5S7	137 aa	Known RBP	11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	TTTY12	Q9BZ98	90 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	EGLN1	Q9GZT9	426 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	HES4	Q9HCC6	221 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	ZMAT5	Q9UDW3	170 aa	Known RBP	11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	LINC01387	J3KSC0	135 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	CSN3	P07498	182 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	DEFB124	Q8NES8	71 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	MISP3	Q96FF7	219 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	REG4	Q9BYZ8	158 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	RBKS	Q9H477	322 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	TUBD1	Q9UJT1	453 aa		11.9	□□□□□ -0.5
MUC1-223	ENST00000611571	RHBDL1	O75783	438 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	HSPB1	P04792	205 aa	Known RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	SUB1	P53999	127 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	MRPS11	P82912	194 aa	Known RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	TRAT1	Q6PIZ9	186 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	ZNF581	Q9P0T4	197 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	TRGC1	P0CF51	173 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	B2M	P61769	119 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	CCL20	P78556	96 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	MEF2B	Q02080	365 aa	Predicted RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	FHL1	Q13642	323 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	FBXW9	Q5XUX1	488 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	CORO2A	Q92828	525 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	IL17B	Q9UHF5	180 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	SLC31A2	O15432	143 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	PTBP3	O95758	552 aa	Known RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	ZNF385C	Q66K41	422 aa	Predicted RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	MOB3B	Q86TA1	216 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	VN1R17P	Q8TDU5	208 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	LINC00271	P0C7V0	271 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	KDF1	Q8NAX2	398 aa	Predicted RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	BOD1	Q96IK1	185 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	MRPL13	Q9BYD1	178 aa	Known RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	WDR54	Q9H977	334 aa		11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	LYRM2	Q9NU23	88 aa	Predicted RBP	11.89	□□□□□ -0.51
MUC1-223	ENST00000611571	PRRG2	O14669	202 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	ZG16	O60844	167 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	IFI6	P09912	130 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	TGIF2LX	Q8IUE1	241 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	SAP25	Q8TEE9	199 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	RAB24	Q969Q5	203 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	FKBP11	Q9NYL4	201 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	HBZ	P02008	142 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	CNN1	P51911	297 aa	Known RBP	11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	RHOB	P62745	196 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	PAX5	Q02548	391 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	RTP5	Q14D33	572 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	LOC102723971	A0A1B0GUV8	181 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	KLK10	O43240	276 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	PLAU	P00749	431 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	COX6A1	P12074	109 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	SGK494	Q96LW2	274 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	ZPBP	Q9BS86	351 aa		11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.88	□□□□□ -0.51
MUC1-223	ENST00000611571	TRAV17	A0A0B4J275	112 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	DBX1	A6NMT0	343 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	WNT9B	O14905	357 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	LGALS4	P56470	323 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	RPL11	P62913	178 aa	Known RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	KIAA1644	Q3SXP7	199 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	TAF15	Q92804	592 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	MARS2	Q96GW9	593 aa	Known RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	LYZL4	Q96KX0	146 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	PITPNC1	Q9UKF7	332 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	CTXND1	A0A1B0GTU2	59 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	SNURFL	B1AK76	121 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	FAM157A	C9JC47	383 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	HRAS	P01112	189 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	WNT5A	P41221	380 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	C21orf62-AS1	Q17RA5	79 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	COX7A1	P24310	79 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	PAX6	P26367	422 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	SUPT4H1	P63272	117 aa	Known RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	UBE2L3	P68036	154 aa	Known RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	FAM216A	Q8WUB2	273 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	GGACT	Q9BVM4	153 aa		11.87	□□□□□ -0.51
MUC1-223	ENST00000611571	CLDN14	O95500	239 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	IGHM	P01871	453 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	RBP4	P02753	201 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	TFF1	P04155	84 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	HNRNPA3	P51991	378 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	TCTA	P57738	103 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	CCL8	P80075	99 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	AARD	Q4LEZ3	155 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	SIRT7	Q9NRC8	400 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	IGKV1D-13	A0A0B4J2D9	117 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	OOEP	A6NGQ2	149 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571		E9PQ18	207 aa		11.86	□□□□□ -0.51
MUC1-223	ENST00000611571	IGKV1-13	P0DP09	117 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms