RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 OR10V1Q8NGI7 309 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 SFRP2Q96HF1 295 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 WDR61Q9GZS3 305 aaKnown RBP10.74□□□□□ -0.69
CTCFL-218ENST00000608440 THYN1Q9P016 225 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 C17orf51A8MQB3 221 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 DEFA4P12838 97 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 CTSEP14091 401 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 PPOXP50336 477 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 SELENOVP59797 346 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 NEIL1Q96FI4 390 aaPredicted RBP10.73□□□□□ -0.69
CTCFL-218ENST00000608440 GMPPAQ96IJ6 420 aaPredicted RBP10.73□□□□□ -0.69
CTCFL-218ENST00000608440 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 RTTNQ86VV8 2226 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 SLC17A3O00476 420 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 MLNRO43193 412 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 S1PR2O95136 353 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 VENTXO95231 258 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 WISP1O95388 367 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 GPR75O95800 540 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 PMP22Q01453 160 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 ARL16Q0P5N6 197 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 Q0VG73 95 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 IZUMO4Q1ZYL8 232 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 C11orf40Q8WZ69 217 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 TMEM38BQ9NVV0 291 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 TAAR3PQ9P1P4 343 aa10.73□□□□□ -0.69
CTCFL-218ENST00000608440 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 IGKV1D-43A0A0B4J1Z2 117 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 IGKV1-9A0A0C4DH69 117 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 FOXI3A8MTJ6 420 aaPredicted RBP10.72□□□□□ -0.69
CTCFL-218ENST00000608440 PLPP3O14495 311 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 MPPED1O15442 326 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 IAPPP10997 89 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 HLA-DOBP13765 273 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 FOXL2P58012 376 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 C2orf27AQ580R0 203 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF841Q6ZN19 808 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 OR10P1Q8NGE3 313 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 ATG2BQ96BY7 2078 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 SLC31A1O15431 190 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF324O75467 553 aaPredicted RBP10.72□□□□□ -0.69
CTCFL-218ENST00000608440 NDUFB4O95168 129 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 ID3Q02535 119 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 SLAQ13239 276 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 KISS1Q15726 138 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
CTCFL-218ENST00000608440 MBNL1Q9NR56 388 aaKnown RBP10.72□□□□□ -0.69
CTCFL-218ENST00000608440 GPR27Q9NS67 375 aa10.72□□□□□ -0.69
CTCFL-218ENST00000608440 C2CD4DB7Z1M9 353 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 C11orf94C9JXX5 98 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 RAMP3O60896 148 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 NAPSAO96009 420 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 CMPK1P30085 196 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 GPR6P46095 362 aaPredicted RBP10.71□□□□□ -0.69
CTCFL-218ENST00000608440 CKS1BP61024 79 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 HERV-K104P61576 105 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 RPS18P62269 152 aaKnown RBP10.71□□□□□ -0.69
CTCFL-218ENST00000608440 C17orf67Q0P5P2 114 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 CCDC71LQ8N9Z2 235 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 TNFSF15O95150 251 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 FBLP22087 321 aaKnown RBP10.71□□□□□ -0.69
CTCFL-218ENST00000608440 UCP1P25874 307 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 P2RY2P41231 377 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 CA7P43166 264 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 NPBWR2P48146 333 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 PLCXD3Q63HM9 321 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 TBC1D26Q86UD7 250 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 LRRC61Q9BV99 259 aa10.71□□□□□ -0.69
CTCFL-218ENST00000608440 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
CTCFL-218ENST00000608440 TCF24Q7RTU0 167 aa10.71□□□□□ -0.7
CTCFL-218ENST00000608440 NPVFQ9HCQ7 196 aa10.71□□□□□ -0.7
CTCFL-218ENST00000608440 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 C17orf112F2Z3M2 114 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 GNB1P62873 340 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 PMCHL1Q16048 86 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 GABRA6Q16445 453 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 BCORP1Q8N888 145 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 MRPL13Q9BYD1 178 aaKnown RBP10.7□□□□□ -0.7
CTCFL-218ENST00000608440 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
CTCFL-218ENST00000608440 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 SPAARA0A1B0GVQ0 90 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 FOXS1O43638 330 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 NUDT14O95848 222 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 SERPINE2P07093 398 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 FCGR2AP12318 317 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 ZNF17P17021 662 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 IL12BP29460 328 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 KIR2DL1P43626 348 aaPredicted RBP10.7□□□□□ -0.7
CTCFL-218ENST00000608440 SLC35B1P78383 322 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 SERF2P84101 59 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 RD3Q7Z3Z2 195 aa10.7□□□□□ -0.7
CTCFL-218ENST00000608440 BATF2Q8N1L9 274 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms