RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 DUX4L9Q6RFH8 374 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-211ENST00000604367 TMEM217Q8N7C4 229 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 PPP1R35Q8TAP8 253 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 LYRM2Q9NU23 88 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-211ENST00000604367 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 BORCS7-ASMTA0A0B4J1R7 106 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 H3BP45 60 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 MGST3O14880 152 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 CST7O76096 145 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 TNFSF4P23510 183 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 GATA4P43694 442 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 PXDC1Q5TGL8 231 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 TMEM252Q8N6L7 170 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 PSG11Q9UQ72 335 aa12.56□□□□□ -0.4
CCDC12-211ENST00000604367 A0A1B0GU03 582 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 K7N7A8 449 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 PITX3O75364 302 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 WNT2P09544 360 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 LPAR6P43657 344 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-211ENST00000604367 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
CCDC12-211ENST00000604367 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 RNF115Q9Y4L5 304 aa12.55□□□□□ -0.4
CCDC12-211ENST00000604367 RNF212BA8MTL3 300 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 ARHGDIBP52566 201 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 UCNP55089 124 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
CCDC12-211ENST00000604367 GNG12Q9UBI6 72 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 DYSFO75923 2080 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 APOC3P02656 99 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 ID4P47928 161 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 SULT1A2P50226 295 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 OR5C1Q8NGR4 320 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
CCDC12-211ENST00000604367 CHD8Q9HCK8 2581 aa12.54□□□□□ -0.4
CCDC12-211ENST00000604367 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 KRASP01116 189 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 GZMHP20718 246 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 PAX9P55771 341 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 SRSF3P84103 164 aaKnown RBP12.53□□□□□ -0.4
CCDC12-211ENST00000604367 PAX5Q02548 391 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 Q3ZCU0 254 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 ODF3L1Q8IXM7 274 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 VKORC1Q9BQB6 163 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
CCDC12-211ENST00000604367 HTD2P86397 168 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 Q6ZRG5 221 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 SPAG16Q8N0X2 631 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 CCL13Q99616 98 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 AGMATQ9BSE5 352 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 TMEM231Q9H6L2 316 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 NUP50Q9UKX7 468 aa12.53□□□□□ -0.4
CCDC12-211ENST00000604367 C17orf98A8MV24 154 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 AGPAT2O15120 278 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 CLDN1O95832 211 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 GYPAP02724 150 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 ADH4P08319 380 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 IAPPP10997 89 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 IRF2P14316 349 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 G6PCP35575 357 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 DYNLT3P51808 116 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 CATR1Q13166 79 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.4
CCDC12-211ENST00000604367 ARV1Q9H2C2 271 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 RFNGQ9Y644 331 aa12.52□□□□□ -0.4
CCDC12-211ENST00000604367 RAI1Q7Z5J4 1906 aaPredicted RBP12.52□□□□□ -0.41
CCDC12-211ENST00000604367 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 C1QL1O75973 258 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 S1PR2O95136 353 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 SLC25A6P12236 298 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
CCDC12-211ENST00000604367 ZNF561Q8N587 486 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 GINS3Q9BRX5 216 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 MMP26Q9NRE1 261 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.41
CCDC12-211ENST00000604367 NCOR2Q9Y618 2525 aa12.52□□□□□ -0.41
CCDC12-211ENST00000604367 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-211ENST00000604367 LINC00473A8K010 186 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 C17orf100A8MU93 164 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 FHITP49789 147 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 BRWD1-AS2P59051 145 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 TLE1Q04724 770 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 MORN2Q502X0 79 aa12.51□□□□□ -0.41
CCDC12-211ENST00000604367 UTF1Q5T230 341 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms