RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TIMM23O14925 209 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 RAB29O14966 203 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 CRYBA1P05813 215 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 HKR1P10072 659 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 NAT1P18440 290 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 ZNF833PQ6ZTB9 187 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 H1FOOQ8IZA3 346 aaPredicted RBP11.15□□□□□ -0.62
RNF40-212ENST00000602784 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
RNF40-212ENST00000602784 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 CFHR4Q92496 578 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 GINS4Q9BRT9 223 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
RNF40-212ENST00000602784 MMP27Q9H306 513 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 IFT46Q9NQC8 304 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 LY6EQ16553 131 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 C16orf82Q7Z2V1 217 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
RNF40-212ENST00000602784 SNAPC3Q92966 411 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 S1PR3Q99500 378 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 MDFIQ99750 246 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 C6orf62Q9GZU0 229 aaPredicted RBP11.14□□□□□ -0.63
RNF40-212ENST00000602784 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
RNF40-212ENST00000602784 SAA2-SAA4A0A096LPE2 208 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 NDUFA7O95182 113 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 SAA2P0DJI9 122 aaPredicted RBP11.13□□□□□ -0.63
RNF40-212ENST00000602784 CD1BP29016 333 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 OR3A3P47888 321 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 REG1BP48304 166 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 ARPC4P59998 168 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
RNF40-212ENST00000602784 EBI3Q14213 229 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 CCBE1Q6UXH8 406 aaPredicted RBP11.13□□□□□ -0.63
RNF40-212ENST00000602784 MOB3BQ86TA1 216 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 OR56B4Q8NH76 319 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 DIRAS2Q96HU8 199 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 NECAP2Q9NVZ3 263 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 C1RLQ9NZP8 487 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
RNF40-212ENST00000602784 MEIS3P1A6NDR6 274 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 CHST1O43916 411 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 TUSC2O75896 110 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 TSPAN9O75954 239 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 OR8U9P0C7N5 309 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 TNFSF8P32971 234 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
RNF40-212ENST00000602784 TAS2R46P59540 309 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 ACTG1P63261 375 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
RNF40-212ENST00000602784 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 CAPSLQ8WWF8 208 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 GCDHQ92947 438 aaPredicted RBP11.12□□□□□ -0.63
RNF40-212ENST00000602784 ABHD14BQ96IU4 210 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
RNF40-212ENST00000602784 RANBP3Q9H6Z4 567 aaPredicted RBP11.12□□□□□ -0.63
RNF40-212ENST00000602784 CTDSPLO15194 276 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 PROP1O75360 226 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 SLC22A5O76082 557 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 OR2F2O95006 317 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
RNF40-212ENST00000602784 OR5H8P0DN80 308 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 CD24P25063 80 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 RCVRNP35243 200 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 GPR12P47775 334 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 RELBQ01201 579 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 SSBP1Q04837 148 aaKnown RBP11.11□□□□□ -0.63
RNF40-212ENST00000602784 FOXL1Q12952 345 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 CDK10Q15131 360 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 PYHIN1Q6K0P9 492 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 TMEM219Q86XT9 240 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 LYSMD2Q8IV50 215 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 OR4F5Q8NH21 305 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
RNF40-212ENST00000602784 NABP2Q9BQ15 211 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 MTFP1Q9UDX5 166 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 RNF150Q9ULK6 438 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
RNF40-212ENST00000602784 A0A1B0GUS0 222 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 A6NHS1 94 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 GABARAPH6UMI1 98 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 M0QZK8 103 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 RBBP9O75884 186 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 MOSP00540 346 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms