RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 PSMB8P28062 276 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 CLDN12P56749 244 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 SSX1Q16384 188 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 CXorf66Q5JRM2 361 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-209ENST00000601357 NPBQ8NG41 125 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 SETD6Q8TBK2 473 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 CNBD2Q96M20 576 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 AGMATQ9BSE5 352 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 GPR61Q9BZJ8 451 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 PIPOXQ9P0Z9 390 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 NBR2O15453 112 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 NDUFA3O95167 84 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 HOXD3P31249 432 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-209ENST00000601357 HLA-DRB3P79483 266 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 ZNF367Q7RTV3 350 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 FAM3DQ96BQ1 224 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 ARHGAP5-AS1Q96IT6 56 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 KCTD7Q96MP8 289 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 DUX3Q96PT4 197 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 CHCHD6Q9BRQ6 235 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 MCRIP2Q9BUT9 160 aaKnown RBP17.72■□□□□ 0.43
SSBP4-209ENST00000601357 Q9N2K0 584 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 C12orf4Q9NQ89 552 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 MGAT4AQ9UM21 535 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 V9GY05 133 aa17.72■□□□□ 0.43
SSBP4-209ENST00000601357 CCL24O00175 119 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 OR5H8P0DN80 308 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 PPIFP30405 207 aaKnown RBP17.71■□□□□ 0.43
SSBP4-209ENST00000601357 VEGFCP49767 419 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 KIR2DS1Q14954 304 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 C5orf64Q2M2E5 130 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 C2orf76Q3KRA6 126 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 RPL39P5Q59GN2 51 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 CD200R1LQ6Q8B3 271 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 MYOZ3Q8TDC0 251 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 PECRQ9BY49 303 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 GHITMQ9H3K2 345 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 OR1A1Q9P1Q5 309 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 BLOC1S6Q9UL45 172 aa17.71■□□□□ 0.43
SSBP4-209ENST00000601357 IGHV7-81A0A0B4J1V7 117 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 WI2-2373I1.2A0A1W2PRP0 233 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 CT45A6P0DMU7 189 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 CT45A5P0DMU8 189 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 CT45A7P0DMV0 189 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 PSMD7P51665 324 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 PLA2G7Q13093 441 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 DEFB136Q30KP8 78 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 PLAC9Q5JTB6 97 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 FAM131AQ6UXB0 335 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 OR56B1Q8NGI3 324 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 OR8U1Q8NH10 309 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 OR51J1Q9H342 316 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 NDUFB11Q9NX14 153 aa17.7■□□□□ 0.42
SSBP4-209ENST00000601357 TRAV1-2A0A0B4J238 106 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 SHISA3A0PJX4 238 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 ATP6V0E1O15342 81 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 SCTP09683 121 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 ZBTB25P24278 435 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 C4orf3Q8WVX3 66 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 PTX4Q96A99 478 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 ABHD14BQ96IU4 210 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 C11orf54Q9H0W9 315 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-209ENST00000601357 RAB26Q9ULW5 256 aa17.69■□□□□ 0.42
SSBP4-209ENST00000601357 IGKV1-6A0A0C4DH72 117 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 TMEM272A0A1B0GTI8 110 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 OR5H14A6NHG9 310 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 G3V318 75 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 DENRO43583 198 aaKnown RBP17.68■□□□□ 0.42
SSBP4-209ENST00000601357 PROP1O75360 226 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 IGLV1-40P01703 118 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 CEACAM6P40199 344 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 RANBP1P43487 201 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 COL7A1Q02388 2944 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 KIAA0141Q14154 515 aaPredicted RBP17.68■□□□□ 0.42
SSBP4-209ENST00000601357 HES5Q5TA89 166 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 LIN54Q6MZP7 749 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 OR5AN1Q8NGI8 311 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 EDARADDQ8WWZ3 215 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 DPF1Q92782 380 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 KCNK7Q9Y2U2 307 aa17.68■□□□□ 0.42
SSBP4-209ENST00000601357 ERICH4A6NGS2 130 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 H0YJW9 148 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 MC5RP33032 325 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 FHL3Q13643 280 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 C19orf54Q5BKX5 351 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 CMSS1Q9BQ75 279 aaKnown RBP17.67■□□□□ 0.42
SSBP4-209ENST00000601357 RAB22AQ9UL26 194 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 WSB1Q9Y6I7 421 aa17.67■□□□□ 0.42
SSBP4-209ENST00000601357 OR10A3P58181 314 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 GABARAPL2P60520 117 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 GLDNQ6ZMI3 551 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-209ENST00000601357 MINDY2Q8NBR6 621 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 KLK15Q9H2R5 256 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 PARP11Q9NR21 331 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 KIAA1456Q9P272 454 aa17.66■□□□□ 0.42
SSBP4-209ENST00000601357 TRAV41A0A0B4J266 112 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 TRDV1A0A1B0GX56 115 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 IFITM5A6NNB3 132 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 TRDCB7Z8K6 153 aa17.65■□□□□ 0.42
SSBP4-209ENST00000601357 RRHO14718 337 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms