RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ADIPOQQ15848 244 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 ADAM5Q6NVV9 412 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 ATRAIDQ6UW56 229 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
VRK3-217ENST00000599538 NUP37Q8NFH4 326 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 NINJ1Q92982 152 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 NARS2Q96I59 477 aaKnown RBP12.04□□□□□ -0.48
VRK3-217ENST00000599538 SNX22Q96L94 193 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 AGMATQ9BSE5 352 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
VRK3-217ENST00000599538 DSCAML1Q8TD84 2053 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 A0A1B0GU03 582 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 MED19A0JLT2 244 aaPredicted RBP12.04□□□□□ -0.48
VRK3-217ENST00000599538 C17orf98A8MV24 154 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 K7N7A8 449 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 EDDM3BP56851 147 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 SELENOVP59797 346 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 VAMP2P63027 116 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 PAX5Q02548 391 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
VRK3-217ENST00000599538 FAM90A1Q86YD7 464 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 FGFRL1Q8N441 504 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 TMEM217Q8N7C4 229 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 WFIKKN1Q96NZ8 548 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 GINS3Q9BRX5 216 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 NUP50Q9UKX7 468 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 PSG11Q9UQ72 335 aa12.04□□□□□ -0.48
VRK3-217ENST00000599538 LINC00473A8K010 186 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 WRBO00258 174 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 MGST3O14880 152 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 PROP1O75360 226 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 APOC3P02656 99 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 SPP1P10451 314 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 PVALBP20472 110 aaPredicted RBP12.03□□□□□ -0.48
VRK3-217ENST00000599538 PTAFRP25105 342 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
VRK3-217ENST00000599538 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
VRK3-217ENST00000599538 NCOR2Q9Y618 2525 aa12.03□□□□□ -0.48
VRK3-217ENST00000599538 RAB19A4D1S5 217 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 AGPAT2O15120 278 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 OR4A8P0C604 315 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 DYNLT3P51808 116 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 FAM209AQ5JX71 171 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 Q6ZRG5 221 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 OR5C1Q8NGR4 320 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 SAT2Q96F10 170 aaPredicted RBP12.02□□□□□ -0.48
VRK3-217ENST00000599538 RNF7Q9UBF6 113 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 DOCK11Q5JSL3 2073 aa12.02□□□□□ -0.48
VRK3-217ENST00000599538 BORCS7-ASMTA0A0B4J1R7 106 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 SPINT2O43291 252 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 S1PR2O95136 353 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 KRASP01116 189 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 IAPPP10997 89 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 SLC25A6P12236 298 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 ADCYAP1P18509 176 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 G6PCP35575 357 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 Q3ZCU0 254 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 BTNL8Q6UX41 500 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 FAM222BQ8WU58 562 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 RND1Q92730 232 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 NEUROG1Q92886 237 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 MMP26Q9NRE1 261 aa12.02□□□□□ -0.49
VRK3-217ENST00000599538 GYPAP02724 150 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 ZNF134P52741 427 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 HTD2P86397 168 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 PJVKQ0ZLH3 352 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 STUMQ69YW2 141 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 TCTEX1D2Q8WW35 142 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 LEAP2Q969E1 77 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 CCL13Q99616 98 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 LOXL3P58215 753 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 TMEM267Q0VDI3 215 aaPredicted RBP12.01□□□□□ -0.49
VRK3-217ENST00000599538 CR1LQ2VPA4 569 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 MORN2Q502X0 79 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 SPAG16Q8N0X2 631 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 FAM216BQ8N7L0 139 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
VRK3-217ENST00000599538 GNG12Q9UBI6 72 aa12.01□□□□□ -0.49
VRK3-217ENST00000599538 TMEM218A2RU14 115 aa12□□□□□ -0.49
VRK3-217ENST00000599538 CLDN1O95832 211 aa12□□□□□ -0.49
VRK3-217ENST00000599538 CGB3P0DN86 165 aa12□□□□□ -0.49
VRK3-217ENST00000599538 CGB7P0DN87 165 aa12□□□□□ -0.49
VRK3-217ENST00000599538 GZMHP20718 246 aa12□□□□□ -0.49
VRK3-217ENST00000599538 BTN1A1Q13410 526 aa12□□□□□ -0.49
VRK3-217ENST00000599538 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
VRK3-217ENST00000599538 TCF23Q7RTU1 214 aa12□□□□□ -0.49
VRK3-217ENST00000599538 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
VRK3-217ENST00000599538 GAFA1Q96PS6 74 aa12□□□□□ -0.49
VRK3-217ENST00000599538 SLC25A31Q9H0C2 315 aa12□□□□□ -0.49
VRK3-217ENST00000599538 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
VRK3-217ENST00000599538 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 SLC31A2O15432 143 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 SYNGR2O43760 224 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 ADH4P08319 380 aa11.99□□□□□ -0.49
VRK3-217ENST00000599538 DANCRP0C864 163 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms