RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MRPS7Q9Y2R9 242 aaKnown RBP16.33■□□□□ 0.2
PNKP-211ENST00000598020 DPPA5A6NC42 116 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 SULT1C2O00338 296 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 TIMM23O14925 209 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 RAB29O14966 203 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 ST8SIA5O15466 376 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 HKR1P10072 659 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 NAT1P18440 290 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 LY6EQ16553 131 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 CCBE1Q6UXH8 406 aaPredicted RBP16.32■□□□□ 0.2
PNKP-211ENST00000598020 ZNF833PQ6ZTB9 187 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 TGIF2LXQ8IUE1 241 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 LAX1Q8IWV1 398 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 H1FOOQ8IZA3 346 aaPredicted RBP16.32■□□□□ 0.2
PNKP-211ENST00000598020 MCFD2Q8NI22 146 aa16.32■□□□□ 0.2
PNKP-211ENST00000598020 SAA2-SAA4A0A096LPE2 208 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 TMEM89A2RUT3 159 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 CRYBA1P05813 215 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 SAA2P0DJI9 122 aaPredicted RBP16.31■□□□□ 0.2
PNKP-211ENST00000598020 DRAM1Q8N682 238 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 SNAPC3Q92966 411 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 ZNF251Q9BRH9 671 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 GINS4Q9BRT9 223 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 C6orf62Q9GZU0 229 aaPredicted RBP16.31■□□□□ 0.2
PNKP-211ENST00000598020 MMP27Q9H306 513 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 RABL2AQ9UBK7 228 aaPredicted RBP16.31■□□□□ 0.2
PNKP-211ENST00000598020 RABL2BQ9UNT1 228 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 GAB2Q9UQC2 676 aa16.31■□□□□ 0.2
PNKP-211ENST00000598020 NDUFA7O95182 113 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 FAM106CPP0CH98 169 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 REG1BP48304 166 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 EBI3Q14213 229 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 C16orf82Q7Z2V1 217 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 SNX29P2Q8IUI4 249 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 OR56B4Q8NH76 319 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 GCDHQ92947 438 aaPredicted RBP16.3■□□□□ 0.2
PNKP-211ENST00000598020 S1PR3Q99500 378 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 DCUN1D5Q9BTE7 237 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 IFT46Q9NQC8 304 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 C1RLQ9NZP8 487 aa16.3■□□□□ 0.2
PNKP-211ENST00000598020 CD1BP29016 333 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 OR3A3P47888 321 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 ACTG1P63261 375 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 DHRS7BQ6IAN0 325 aaPredicted RBP16.29■□□□□ 0.2
PNKP-211ENST00000598020 MOB3BQ86TA1 216 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.29■□□□□ 0.2
PNKP-211ENST00000598020 OR5AP2Q8NGF4 316 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 DIRAS2Q96HU8 199 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 ABHD14BQ96IU4 210 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 ABHD1Q96SE0 405 aa16.29■□□□□ 0.2
PNKP-211ENST00000598020 MEIS3P1A6NDR6 274 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 CHST1O43916 411 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 TUSC2O75896 110 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 SNRNP70P08621 437 aaKnown RBP16.28■□□□□ 0.2
PNKP-211ENST00000598020 CD24P25063 80 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 COMPP49747 757 aaPredicted RBP16.28■□□□□ 0.2
PNKP-211ENST00000598020 ARPC4P59998 168 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 FOXB2Q5VYV0 432 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 CAPSLQ8WWF8 208 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 NECAP2Q9NVZ3 263 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 ZNF221Q9UK13 617 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 OR2W1Q9Y3N9 320 aa16.28■□□□□ 0.2
PNKP-211ENST00000598020 PROP1O75360 226 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 TSPAN9O75954 239 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 OR2F2O95006 317 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 OR8U9P0C7N5 309 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 MRPS10P82664 201 aaKnown RBP16.27■□□□□ 0.2
PNKP-211ENST00000598020 RELBQ01201 579 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 FOXL1Q12952 345 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 TMEM219Q86XT9 240 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 OR8U1Q8NH10 309 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 RBM14Q96PK6 669 aaKnown RBP16.27■□□□□ 0.2
PNKP-211ENST00000598020 NABP2Q9BQ15 211 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 SOSTQ9BQB4 213 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 RANBP3Q9H6Z4 567 aaPredicted RBP16.27■□□□□ 0.2
PNKP-211ENST00000598020 RNF150Q9ULK6 438 aa16.27■□□□□ 0.2
PNKP-211ENST00000598020 TNFSF8P32971 234 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 GPR12P47775 334 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 TAS2R46P59540 309 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 LSAMPQ13449 338 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 CDK10Q15131 360 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 FBLN7Q53RD9 439 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 RPL39P5Q59GN2 51 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 PYHIN1Q6K0P9 492 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 LYSMD2Q8IV50 215 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 AKR1E2Q96JD6 320 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 MRPL20Q9BYC9 149 aaKnown RBP16.26■□□□□ 0.19
PNKP-211ENST00000598020 MMP24Q9Y5R2 645 aa16.26■□□□□ 0.19
PNKP-211ENST00000598020 CTDSPLO15194 276 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 IGKV1D-33P01593 117 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 IGKV1-33P01594 117 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 CT45A6P0DMU7 189 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 CT45A5P0DMU8 189 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 CT45A7P0DMV0 189 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 OR5H8P0DN80 308 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 NFYAP23511 347 aaPredicted RBP16.25■□□□□ 0.19
PNKP-211ENST00000598020 RCVRNP35243 200 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 RAG2P55895 527 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 Q6ZSV7 163 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 OVCH2Q7RTZ1 564 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms