RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 SPNP16150 400 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 MAPK3P27361 379 aaPredicted RBP8.14□□□□□ -1.11
LSM4-205ENST00000597776 RPS27AP62979 156 aaKnown RBP8.14□□□□□ -1.11
LSM4-205ENST00000597776 CX3CL1P78423 397 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 UNC119Q13432 240 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 PLGLAQ15195 96 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 LY6G6FQ5SQ64 297 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 LRRTM1Q86UE6 522 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 ZNF429Q86V71 674 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 SVOPQ8N4V2 548 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 SETD6Q8TBK2 473 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 ABHD5Q8WTS1 349 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 ARPC1AQ92747 370 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 ABHD14BQ96IU4 210 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 NICN1Q9BSH3 213 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 TMEM59Q9BXS4 323 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 TOLLIPQ9H0E2 274 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 CHMP1AQ9HD42 196 aaPredicted RBP8.14□□□□□ -1.11
LSM4-205ENST00000597776 CNOT2Q9NZN8 540 aaKnown RBP8.14□□□□□ -1.11
LSM4-205ENST00000597776 GHRLQ9UBU3 117 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 STEAP1Q9UHE8 339 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 GAB2Q9UQC2 676 aa8.14□□□□□ -1.11
LSM4-205ENST00000597776 A0A0A6YYD4 124 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 LINC01619G3V211 115 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 H0YJW9 148 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 C3orf84H3BNL1 204 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 NAPSAO96009 420 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 CD1AP06126 327 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 UBBP0CG47 229 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 CT45A6P0DMU7 189 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 CT45A5P0DMU8 189 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 CT45A7P0DMV0 189 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 CRIP2P52943 208 aaPredicted RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 ACSM3Q53FZ2 586 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 RBM48Q5RL73 367 aaKnown RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 ZNF660Q6AZW8 331 aaPredicted RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 FAM71F2Q6NXP2 309 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 C8orf59Q8N0T1 100 aaPredicted RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 PACRGLQ8N7B6 248 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 NANOGP1Q8N7R0 232 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 BPIFB6Q8NFQ5 453 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 THRSPQ92748 146 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 RCHY1Q96PM5 261 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 HDHD3Q9BSH5 251 aaPredicted RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 FAM103A1Q9BTL3 118 aaKnown RBP8.13□□□□□ -1.11
LSM4-205ENST00000597776 TMED9Q9BVK6 235 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 PIPOXQ9P0Z9 390 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 OR1A1Q9P1Q5 309 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 SLC23A1Q9UHI7 598 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 LRRC42Q9Y546 428 aa8.13□□□□□ -1.11
LSM4-205ENST00000597776 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 OR5H14A6NHG9 310 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 TRIM64CA6NLI5 447 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 H7C2Y5 167 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 RAB29O14966 203 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
LSM4-205ENST00000597776 FRMD6-AS1P0C7T7 363 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 GP9P14770 177 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 LINC00205P59089 165 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 QRFPP83859 136 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 RCN1Q15293 331 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 C1orf100Q5SVJ3 147 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 ZNF880Q6PDB4 577 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 PPP1R27Q86WC6 154 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 DRAXINQ8NBI3 349 aaPredicted RBP8.12□□□□□ -1.11
LSM4-205ENST00000597776 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 MS4A10Q96PG2 267 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 CLCC1Q96S66 551 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 TM2D1Q9BX74 207 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 PLCXD1Q9NUJ7 323 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 FKBP14Q9NWM8 211 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 ERGIC3Q9Y282 383 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 WASHC3Q9Y3C0 194 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 NUBP2Q9Y5Y2 271 aa8.12□□□□□ -1.11
LSM4-205ENST00000597776 RYR2Q92736 4967 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 TMEM14DPA8MWL7 114 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 EBAG9O00559 213 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 SLC22A1O15245 554 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 SOCS1O15524 211 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 TPPP2P59282 170 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 P2RY14Q15391 338 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 ACTBL2Q562R1 376 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 GLT8D1Q68CQ7 371 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 ACSM6Q6P461 480 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 CEACAM19Q7Z692 300 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 TCTEX1D1Q8N7M0 179 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 OR5AN1Q8NGI8 311 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 KCNG3Q8TAE7 436 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 PHYHIPQ92561 330 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 AGMATQ9BSE5 352 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 C11orf54Q9H0W9 315 aaPredicted RBP8.11□□□□□ -1.11
LSM4-205ENST00000597776 C8orf4Q9NR00 106 aa8.11□□□□□ -1.11
LSM4-205ENST00000597776 PLEKHJ1Q9NW61 149 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms