RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MC5RP33032 325 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 MECP2P51608 486 aaKnown RBP7.65□□□□□ -1.18
TRIM28-210ENST00000597618 ALDH3A2P51648 485 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 PPP3R1P63098 170 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 GPR176Q14439 515 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 SLC22A6Q4U2R8 563 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 DDI2Q5TDH0 399 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 RAB12Q6IQ22 244 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
TRIM28-210ENST00000597618 GRPEL2Q8TAA5 225 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 GHSRQ92847 366 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 KCTD12Q96CX2 325 aaKnown RBP7.65□□□□□ -1.18
TRIM28-210ENST00000597618 YPEL2Q96QA6 119 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 CLCC1Q96S66 551 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 RNF5Q99942 180 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 ALG8Q9BVK2 526 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 GABARAPL3Q9BY60 117 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 IFI27L2Q9H2X8 130 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
TRIM28-210ENST00000597618 PIPOXQ9P0Z9 390 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 WASHC3Q9Y3C0 194 aa7.65□□□□□ -1.18
TRIM28-210ENST00000597618 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 A0A1W2PP11 408 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 H0YJW9 148 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 H7C2Y5 167 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 DEDDO75618 318 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 SPDEFO95238 335 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 MAS1P04201 325 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 CD7P09564 240 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 POLR2IP36954 125 aaKnown RBP7.64□□□□□ -1.19
TRIM28-210ENST00000597618 SOX2P48431 317 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 ATP6AP1Q15904 470 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
TRIM28-210ENST00000597618 ZNF343Q6P1L6 599 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 TRUB1Q8WWH5 349 aaKnown RBP7.64□□□□□ -1.19
TRIM28-210ENST00000597618 GALMQ96C23 342 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 OVOL2Q9BRP0 275 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 WFDC10AQ9H1F0 79 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 IMPAD1Q9NX62 359 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 ADAM30Q9UKF2 790 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 PEX16Q9Y5Y5 336 aa7.64□□□□□ -1.19
TRIM28-210ENST00000597618 A0A0B4J203 849 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 FAM90A7PA6NKC0 464 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 SNTNA6NMZ2 147 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 FAM90A23PA8MXZ1 464 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 RAB29O14966 203 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 NDUFB8O95169 186 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 TRBV12-3P01733 135 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 GLAP06280 429 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 CT45A6P0DMU7 189 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 CT45A5P0DMU8 189 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 CT45A7P0DMV0 189 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 BDKRB2P30411 391 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 GBX2P52951 348 aaPredicted RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 DYRK1AQ13627 763 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 FXYD3Q14802 87 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 PSG5Q15238 335 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 SLC25A30Q5SVS4 291 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 C6orf141Q5SZD1 244 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 MEDAGQ5VYS4 303 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 DMKNQ6E0U4 476 aaPredicted RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 BVESQ8NE79 360 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 OR5T1Q8NG75 326 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 OR5AN1Q8NGI8 311 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 GPR148Q8TDV2 347 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 DYNLRB2Q8TF09 96 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 SNAPC3Q92966 411 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 USMG5Q96IX5 58 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 TMEM68Q96MH6 324 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 TSNAXQ99598 290 aaKnown RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 GGTLC1Q9BX51 225 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 TINAGL1Q9GZM7 467 aaPredicted RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 ISG20L2Q9H9L3 353 aaKnown RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 STEAP1Q9UHE8 339 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 EXOGQ9Y2C4 368 aaKnown RBP7.63□□□□□ -1.19
TRIM28-210ENST00000597618 LRRC42Q9Y546 428 aa7.63□□□□□ -1.19
TRIM28-210ENST00000597618 DNAH6Q9C0G6 4158 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 A0A0J9YWU9 116 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 ZNF785A8K8V0 405 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 E9PI62 339 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 GPX5O75715 221 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 T-ENOLP0DO92 83 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 LGALS7P47929 136 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 TNFRSF9Q07011 255 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 RIPK1Q13546 671 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 GUCA2BQ16661 112 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 RPL39P5Q59GN2 51 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 GLDNQ6ZMI3 551 aaPredicted RBP7.62□□□□□ -1.19
TRIM28-210ENST00000597618 SLC16A13Q7RTY0 426 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 LHFPL3Q86UP9 236 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 MRPL30Q8TCC3 161 aaKnown RBP7.62□□□□□ -1.19
TRIM28-210ENST00000597618 LGALS12Q96DT0 336 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 ZNF184Q99676 751 aaPredicted RBP7.62□□□□□ -1.19
TRIM28-210ENST00000597618 ZC4H2Q9NQZ6 224 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 ABRACLQ9P1F3 81 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 POMPQ9Y244 141 aa7.62□□□□□ -1.19
TRIM28-210ENST00000597618 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 UBE2QL1A1L167 161 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms