RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 FAHD2AQ96GK7 314 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 AKR1E2Q96JD6 320 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
VRK3-212ENST00000596814 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
VRK3-212ENST00000596814 hCG_2014768A0A024R1R8 64 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 IGHV2-26A0A0B4J1V2 119 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 OR4E1P0C645 316 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 PRTN3P24158 256 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 COX7A1P24310 79 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 S100GP29377 79 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 GPR12P47775 334 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 DLX1P56177 255 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 MSMO1Q15800 293 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 TMEM128Q5BJH2 165 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 GLDNQ6ZMI3 551 aaPredicted RBP11.97□□□□□ -0.49
VRK3-212ENST00000596814 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 DRAM1Q8N682 238 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 LINC01356Q8N9X3 169 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 MAPK1IP1LQ8NDC0 245 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 OR9G1Q8NH87 305 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 SEC22CQ9BRL7 303 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 CLEC7AQ9BXN2 247 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 ZNF221Q9UK13 617 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 ALG5Q9Y673 324 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■■□ 21.2
VRK3-212ENST00000596814 CREBBPQ92793 2442 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 J3QR06 171 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 VAMP1P23763 118 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 RND3P61587 244 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 PRB3Q04118 309 aaPredicted RBP11.97□□□□□ -0.49
VRK3-212ENST00000596814 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 VMO1Q7Z5L0 202 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 LYG1Q8N1E2 194 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 LINC00311Q8N616 119 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 ZBTB34Q8NCN2 500 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 OR13D1Q8NGV5 346 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 ZNF596Q8TC21 504 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 RTN4IP1Q8WWV3 396 aaPredicted RBP11.97□□□□□ -0.49
VRK3-212ENST00000596814 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
VRK3-212ENST00000596814 GPN1Q9HCN4 374 aaPredicted RBP11.97□□□□□ -0.49
VRK3-212ENST00000596814 ZNRD1Q9P1U0 126 aa11.97□□□□□ -0.49
VRK3-212ENST00000596814 MAP1AP78559 2803 aaPredicted RBP11.96□□□□□ -0.49
VRK3-212ENST00000596814 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 TEX13DA0A0J9YY54 714 aaPredicted RBP11.96□□□□□ -0.49
VRK3-212ENST00000596814 CRYM-AS1A6NIL9 109 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 TOR1AO14656 332 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 TNFSF12O43508 249 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 TOX4O94842 621 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 HLA-AP01891 365 aaKnown RBP11.96□□□□□ -0.49
VRK3-212ENST00000596814 MMP9P14780 707 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 DHODHQ02127 395 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 CBX3Q13185 183 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 DHRS2Q13268 280 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 LYG2Q86SG7 212 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 PNKDQ8N490 385 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 OR52B4Q8NGK2 314 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 TNFRSF14Q92956 283 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 C5orf30Q96GV9 206 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 PCGF1Q9BSM1 259 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 GHITMQ9H3K2 345 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 NAA60Q9H7X0 242 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 HEXA-AS1Q9H8Q6 139 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 SDHAF2Q9NX18 166 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.49
VRK3-212ENST00000596814 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 A0A0A6YYJ9 748 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 RAB29O14966 203 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
VRK3-212ENST00000596814 PRRX1P54821 245 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 PAX8Q06710 450 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 KLRD1Q13241 179 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 TMEM249Q2WGJ8 235 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 DCAF12L2Q5VW00 463 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 C11orf88Q6PI97 169 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 TBC1D26Q86UD7 250 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.95□□□□□ -0.5
VRK3-212ENST00000596814 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
VRK3-212ENST00000596814 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 SNRPGP15A8MWD9 76 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 MPPED1O15442 326 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 CREBL2O60519 120 aaPredicted RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 SUPT4H1P63272 117 aaKnown RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 HLA-DRB5Q30154 266 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 RPL39P5Q59GN2 51 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 ZNF626Q68DY1 528 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 ZNF431Q8TF32 576 aaPredicted RBP11.94□□□□□ -0.5
VRK3-212ENST00000596814 TMEM186Q96B77 213 aa11.94□□□□□ -0.5
VRK3-212ENST00000596814 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms