RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR2AK2Q8NG84 335 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 CAPSLQ8WWF8 208 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 FAHD2AQ96GK7 314 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 SEC22CQ9BRL7 303 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 OR51J1Q9H342 316 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 ONECUT1Q9UBC0 465 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 KCNIP3Q9Y2W7 256 aa10.72□□□□□ -0.69
SHKBP1-209ENST00000595803 SNRPGP15A8MWD9 76 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 C22orf46C9J442 243 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ITGB1BP1O14713 200 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 SLC22A5O76082 557 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV3-7P01780 117 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 USF1P22415 310 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 VAMP1P23763 118 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ZFP36P26651 326 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 YLPM1P49750 1951 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 RAB7AP51149 207 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 BCAP31P51572 246 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 PIGPP57054 158 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ARF6P62330 175 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 LCN2P80188 198 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 DHODHQ02127 395 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 TMEM128Q5BJH2 165 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ZBTB34Q8NCN2 500 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF431Q8TF32 576 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 FAM216AQ8WUB2 273 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 LEAP2Q969E1 77 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 DMRTB1Q96MA1 342 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 Q96MF0 132 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 SUCNR1Q9BXA5 334 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF221Q9UK13 617 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 PSG11Q9UQ72 335 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 SESN1Q9Y6P5 492 aa10.71□□□□□ -0.69
SHKBP1-209ENST00000595803 MEGF8Q7Z7M0 2845 aa10.71□□□□□ -0.7
SHKBP1-209ENST00000595803 DOCK11Q5JSL3 2073 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 A0A0B4J293 547 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 C9orf170A2RU37 121 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 A8MXK9 166 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 ST8SIA5O15466 376 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 ENSAO43768 121 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 SSNA1O43805 119 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 CREBL2O60519 120 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 SFT2D2O95562 160 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 RBP4P02753 201 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 GPR12P47775 334 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 CT45A1Q5HYN5 189 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 PRSS57Q6UWY2 283 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 CADM3Q8N126 398 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 UXS1Q8NBZ7 420 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 CT45A3Q8NHU0 189 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 RTN4IP1Q8WWV3 396 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 TMEM230Q96A57 120 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 MED28Q9H204 178 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 GHITMQ9H3K2 345 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 SLC2A9Q9NRM0 540 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 DSCAML1Q8TD84 2053 aa10.7□□□□□ -0.7
SHKBP1-209ENST00000595803 A0A1W2PPE3 182 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 HMX3A6NHT5 357 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 CRYM-AS1A6NIL9 109 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 FAM157AC9JC47 383 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 M0R1W7 72 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 TOR1AO14656 332 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 MPPED1O15442 326 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 PGLYRP1O75594 196 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 HLA-AP01891 365 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ANXA3P12429 323 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 GNG10P50151 68 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF134P52741 427 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 PRRX1P54821 245 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 RND3P61587 244 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 SLC9A3R2Q15599 337 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 MSMO1Q15800 293 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 Q3ZCU0 254 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF626Q68DY1 528 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 BTNL3Q6UXE8 466 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 LDLRAD3Q86YD5 345 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ABHD12Q8N2K0 398 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 C12orf45Q8N5I9 185 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ZNF645Q8N7E2 425 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 BVESQ8NE79 360 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 CASTOR1Q8WTX7 329 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 ABHD14AQ9BUJ0 271 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 OR2D2Q9H210 308 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 TMEM133Q9H2Q1 129 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 NAA60Q9H7X0 242 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 GAB2Q9UQC2 676 aa10.69□□□□□ -0.7
SHKBP1-209ENST00000595803 MALRD1Q5VYJ5 2156 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 IGHV2-70DA0A0C4DH43 119 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 SLC31A2O15432 143 aa10.68□□□□□ -0.7
SHKBP1-209ENST00000595803 TNFSF12O43508 249 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms