RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TM2D1Q9BX74 207 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 SCN3BQ9NY72 215 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 KIAA1456Q9P272 454 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 AK3Q9UIJ7 227 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 AK6Q9Y3D8 172 aaKnown RBP13.26□□□□□ -0.29
CCDC9-202ENST00000595659 A3GALT2U3KPV4 340 aa13.26□□□□□ -0.29
CCDC9-202ENST00000595659 FCN1O00602 326 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 RAMP3O60896 148 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 CT45A6P0DMU7 189 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 CT45A5P0DMU8 189 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 CT45A7P0DMV0 189 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 SNRPBP14678 240 aaKnown RBP13.25□□□□□ -0.29
CCDC9-202ENST00000595659 RPS25P62851 125 aaKnown RBP13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 LY6G6FQ5SQ64 297 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ZNF880Q6PDB4 577 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 TMEM91Q6ZNR0 172 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ZNF491Q8N8L2 437 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 NPBQ8NG41 125 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 MYOZ3Q8TDC0 251 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 UFD1Q92890 307 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 GFI1Q99684 422 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
CCDC9-202ENST00000595659 LPAR5Q9H1C0 372 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 OR1A1Q9P1Q5 309 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ZMAT5Q9UDW3 170 aaKnown RBP13.25□□□□□ -0.29
CCDC9-202ENST00000595659 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 ZNF580Q9UK33 172 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 VSIG4Q9Y279 399 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
CCDC9-202ENST00000595659 BPNT1O95861 308 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 IGLV1-40P01703 118 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 RAB9AP51151 201 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 AQP4P55087 323 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 CLDN12P56749 244 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 LINC00205P59089 165 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 FHL3Q13643 280 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 IRF3Q14653 427 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 PLGLAQ15195 96 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 ASPHD1Q5U4P2 390 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 DRAXINQ8NBI3 349 aaPredicted RBP13.24□□□□□ -0.29
CCDC9-202ENST00000595659 OR6M1Q8NGM8 313 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 CLCC1Q96S66 551 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 PIPOXQ9P0Z9 390 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 RNF150Q9ULK6 438 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 COL7A1Q02388 2944 aa13.24□□□□□ -0.29
CCDC9-202ENST00000595659 A0A1W2PN81 502 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 H7C2Y5 167 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 I3L521 148 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 RAB29O14966 203 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 SOX15O60248 233 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 GSTP1P09211 210 aaKnown RBP13.23□□□□□ -0.29
CCDC9-202ENST00000595659 CD37P11049 281 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 ARSBP15848 533 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 CHRNA7P36544 502 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 CEACAM6P40199 344 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 ABHD5Q8WTS1 349 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 ASCL2Q99929 193 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 CCDC90BQ9GZT6 254 aa13.23□□□□□ -0.29
CCDC9-202ENST00000595659 C11orf54Q9H0W9 315 aaPredicted RBP13.23□□□□□ -0.29
CCDC9-202ENST00000595659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC9-202ENST00000595659 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
CCDC9-202ENST00000595659 H0YJW9 148 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 RRHO14718 337 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 HSPA12AO43301 675 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 NDUFA3O95167 84 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 LY86O95711 162 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 SCTP09683 121 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 MAP2K4P45985 399 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 VEGFCP49767 419 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 TMEM50BP56557 158 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 CX3CL1P78423 397 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 ZNF616Q08AN1 781 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 DCUN1D4Q92564 292 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 ARHGAP5-AS1Q96IT6 56 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 WWC2-AS2Q96NR7 200 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 FAM103A1Q9BTL3 118 aaKnown RBP13.22□□□□□ -0.29
CCDC9-202ENST00000595659 URM1Q9BTM9 101 aaKnown RBP13.22□□□□□ -0.29
CCDC9-202ENST00000595659 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
CCDC9-202ENST00000595659 KMT2CQ8NEZ4 4911 aaKnown RBP13.21□□□□□ -0.29
CCDC9-202ENST00000595659 SLC17A2O00624 439 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 OR8U8P0C7N1 319 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 DCTN2Q13561 401 aaKnown RBP13.21□□□□□ -0.29
CCDC9-202ENST00000595659 TPBGQ13641 420 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 RAB11BQ15907 218 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 FAM71F2Q6NXP2 309 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 MOB1BQ7L9L4 216 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 FAM89BQ8N5H3 189 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 AGMATQ9BSE5 352 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 RIMS4Q9H426 269 aaPredicted RBP13.21□□□□□ -0.29
CCDC9-202ENST00000595659 TPRKBQ9Y3C4 175 aa13.21□□□□□ -0.29
CCDC9-202ENST00000595659 OR5H14A6NHG9 310 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms