RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ODF3L1Q8IXM7 274 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 C5orf56Q8N8D9 126 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 OR5H6Q8NGV6 325 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 PHF21AQ96BD5 680 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 SCGNO76038 276 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 MOSP00540 346 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 KIR2DS1Q14954 304 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 ARL6IP1Q15041 203 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 RPL39P5Q59GN2 51 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF833PQ6ZTB9 187 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 OR4A4PQ8NGN8 299 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 ABHD14BQ96IU4 210 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 FUNDC2Q9BWH2 189 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 PIPOXQ9P0Z9 390 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 ETV7Q9Y603 341 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
CLIP3-205ENST00000592017 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 RAB29O14966 203 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 FGF16O43320 207 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 SERPINB10P48595 397 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 GNG2P59768 71 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 NCS1P62166 190 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 EBI3Q14213 229 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 CENPVQ7Z7K6 275 aaPredicted RBP11.05□□□□□ -0.64
CLIP3-205ENST00000592017 Q8N6K4 173 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 SLC25A38Q96DW6 304 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 S1PR3Q99500 378 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
CLIP3-205ENST00000592017 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 C11orf54Q9H0W9 315 aaPredicted RBP11.05□□□□□ -0.64
CLIP3-205ENST00000592017 RDH8Q9NYR8 311 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 RNF150Q9ULK6 438 aa11.05□□□□□ -0.64
CLIP3-205ENST00000592017 OPN1MWP04001 364 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 GSTP1P09211 210 aaKnown RBP11.04□□□□□ -0.64
CLIP3-205ENST00000592017 OPN1MW2P0DN77 364 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 OPN1MW3P0DN78 364 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 RPS19P39019 145 aaKnown RBP11.04□□□□□ -0.64
CLIP3-205ENST00000592017 SCAND1P57086 179 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 MMDQ15546 238 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 HACD4Q5VWC8 232 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 GLDNQ6ZMI3 551 aaPredicted RBP11.04□□□□□ -0.64
CLIP3-205ENST00000592017 OR13F1Q8NGS4 319 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 CABLES2Q9BTV7 478 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 ST6GALNAC5Q9BVH7 336 aa11.04□□□□□ -0.64
CLIP3-205ENST00000592017 TRAV18A0A075B6X5 111 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 DTYMKP23919 212 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 GPR12P47775 334 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 VBP1P61758 197 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF260Q3ZCT1 412 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 KHDC1LQ5JSQ8 128 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 FAM71F2Q6NXP2 309 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 FAM131AQ6UXB0 335 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 SLC35E3Q7Z769 313 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 Q8N9W7 124 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF251Q9BRH9 671 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
CLIP3-205ENST00000592017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLIP3-205ENST00000592017 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF221Q9UK13 617 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 SPATA2Q9UM82 520 aa11.03□□□□□ -0.64
CLIP3-205ENST00000592017 RBM7Q9Y580 266 aaKnown RBP11.03□□□□□ -0.64
CLIP3-205ENST00000592017 A0A1W2PRX2 142 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 G3V4G9 280 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 F2RL1P55085 397 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 ACTBP60709 375 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 C10orf99Q6UWK7 81 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
CLIP3-205ENST00000592017 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 OR8H1Q8NGG4 311 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 NOL4LQ96MY1 436 aaPredicted RBP11.02□□□□□ -0.65
CLIP3-205ENST00000592017 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 OR2D2Q9H210 308 aa11.02□□□□□ -0.65
CLIP3-205ENST00000592017 LIN7CQ9NUP9 197 aaKnown RBP11.02□□□□□ -0.65
CLIP3-205ENST00000592017 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 H7C2Y5 167 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 M0R1X1 148 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 SSX5O60225 188 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 OR8U9P0C7N5 309 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 CT45A6P0DMU7 189 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 CT45A5P0DMU8 189 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms