RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 TRAPPC2P0DI81 140 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 TRAPPC2BP0DI82 140 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 TBPP20226 339 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 ZBTB25P24278 435 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 MECP2P51608 486 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 MIDNQ504T8 468 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 VAX1Q5SQQ9 334 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 ZNF626Q68DY1 528 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 TMED4Q7Z7H5 227 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 PNKDQ8N490 385 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 OR11H7Q8NGC8 314 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 OR9G1Q8NH87 305 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 IL1F10Q8WWZ1 152 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 PRRT1Q99946 306 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 CABLES2Q9BTV7 478 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 TOLLIPQ9H0E2 274 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 EHFQ9NZC4 300 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 GNG12Q9UBI6 72 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 INAFM1C9JVW0 142 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 IGLV1-47P01700 117 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 SRP14P37108 136 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 PRRX1P54821 245 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 KLRD1Q13241 179 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 SCGB2A2Q13296 93 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 LTC4SQ16873 150 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 CHRFAM7AQ494W8 412 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 MORN2Q502X0 79 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 C9orf139Q6ZV77 190 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 BEND2Q8NDZ0 799 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 ZNF596Q8TC21 504 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 MED28Q9H204 178 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 PSG11Q9UQ72 335 aa13.9□□□□□ -0.18
RPRD1A-209ENST00000590898 ZFHX3Q15911 3703 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 IGKV1-6A0A0C4DH72 117 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 ODF3BA8MYP8 253 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 CXCL3P19876 107 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 OR3A3P47888 321 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 EIF2B2P49770 351 aaKnown RBP13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 NKX2-5P52952 324 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 UBE2MP61081 183 aaKnown RBP13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 HERPUD1Q15011 391 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 ACTBL2Q562R1 376 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 OVCH2Q7RTZ1 564 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 LINC00311Q8N616 119 aa13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 SLC25A21Q9BQT8 299 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-209ENST00000590898 J3QR06 171 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 TOR1AO14656 332 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 ITGB1BP1O14713 200 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 COX7A1P24310 79 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 TAS2R46P59540 309 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 IGSF11Q5DX21 431 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 OR52L2PQ8NGH6 319 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 OR10J5Q8NHC4 309 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 ZNF69Q9UC07 566 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 SLC23A1Q9UHI7 598 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 NPFFO15130 113 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 HSPA12AO43301 675 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 SSNA1O43805 119 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 PRAF2O60831 178 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 CEACAM6P40199 344 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 LGALS4P56470 323 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 ARPC4P59998 168 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 TSPAN5P62079 268 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 PDZD9Q8IXQ8 264 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 ARRDC1Q8N5I2 433 aa13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 TBL2Q9Y4P3 447 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-209ENST00000590898 CRLF1O75462 422 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 ARG1P05089 322 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 BAMBIQ13145 260 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 MINOS1Q5TGZ0 78 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 AADACL3Q5VUY0 350 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 ZNF439Q8NDP4 499 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 TERB2Q8NHR7 220 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 FAM216AQ8WUB2 273 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 MS4A7Q9GZW8 240 aaPredicted RBP13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 MINOS1-NBL1R4GNA1 71 aa13.87□□□□□ -0.19
RPRD1A-209ENST00000590898 OR5H14A6NHG9 310 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 SMLR1H3BR10 107 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 IL5P05113 134 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 SRD5A1P18405 259 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 CDK10Q15131 360 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 HLA-DRB5Q30154 266 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 UTF1Q5T230 341 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 BRD3OSQ6XYD6 125 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 LHFPL1Q86WI0 220 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 ADAD2Q8NCV1 583 aaKnown RBP13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 EDARADDQ8WWZ3 215 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 NECAP2Q9NVZ3 263 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
RPRD1A-209ENST00000590898 FAM172BPA6NC97 362 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms